RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 C20orf27Q9GZN8 174 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 CNTN3Q9P232 1028 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 TADA2AO75478 443 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 TOP3BO95985 862 aaKnown RBP11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 CYBAP13498 195 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 CCL23P55773 120 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 C16orf72Q14CZ0 275 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 KCNT1Q5JUK3 1230 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 GRAMD4Q6IC98 578 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 SLC44A1Q8WWI5 657 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 BTBD9Q96Q07 612 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 MRPS26Q9BYN8 205 aaKnown RBP11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 TRPV6Q9H1D0 765 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 XAB2Q9HCS7 855 aaKnown RBP11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 IP6K2Q9UHH9 426 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 DNAJC16Q9Y2G8 782 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 PCDHB7Q9Y5E2 793 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 CCDC78A2IDD5 438 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 FAM155AB1AL88 458 aaPredicted RBP11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 CST8O60676 142 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 PSMA2P25787 234 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 GRM5P41594 1212 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 POU5F1BQ06416 359 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 TSTA3Q13630 321 aaPredicted RBP11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 C6orf52Q5T4I8 152 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 FAM102AQ5T9C2 384 aaPredicted RBP11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 CES4AQ5XG92 561 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 NDUFAF2Q8N183 169 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 ZNF606Q8WXB4 792 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 SEPT8Q92599 483 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 C1orf21Q9H246 121 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 CDHR5Q9HBB8 845 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 FAM105AQ9NUU6 356 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 FETUBQ9UGM5 382 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 PADI3Q9ULW8 664 aa11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 DRG1Q9Y295 367 aaKnown RBP11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 FARP1Q9Y4F1 1045 aaPredicted RBP11.45□□□□□ -0.58
RPRD1B-201ENST00000373433 hCG_1818297A0A087WSY0 165 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 IGKV6-21A0A0C4DH24 114 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 CRTAMO95727 393 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 ITGAVP06756 1048 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 ATICP31939 592 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 MSX2P35548 267 aaPredicted RBP11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 HDAC4P56524 1084 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 TSPY1Q01534 308 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 SLC18A2Q05940 514 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 PDK1Q15118 436 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 RARS2Q5T160 578 aaKnown RBP11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 TTC39BQ5VTQ0 682 aaPredicted RBP11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 KDELC2Q7Z4H8 507 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 POLNQ7Z5Q5 900 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 ZNF677Q86XU0 584 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 RYBPQ8N488 228 aaPredicted RBP11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 RSAD1Q9HA92 442 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 THEGQ9P2T0 379 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 DOLKQ9UPQ8 538 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 SSX2IPQ9Y2D8 614 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 PLLPQ9Y342 182 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 TIMM13Q9Y5L4 95 aaPredicted RBP11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 DNAJA2O60884 412 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 PIGRP01833 764 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 SNRPAP09012 282 aaKnown RBP11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 NELFEP18615 380 aaKnown RBP11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 SCNN1GP51170 649 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 EMP3P54852 163 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 MROH9Q5TGP6 573 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 CCDC33Q8N5R6 958 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 NAT8LQ8N9F0 302 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 FBXL18Q96ME1 805 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 ZFP42Q96MM3 310 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 SMYD2Q9NRG4 433 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 PARVAQ9NVD7 372 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 ZNF180Q9UJW8 692 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 MOXD2PA6NHM9 499 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 KLF11O14901 512 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 B4GALT4O60513 344 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 C4BPAP04003 597 aaKnown RBP11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 MRPS22P82650 360 aaKnown RBP11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 RWDD4Q6NW29 188 aaKnown RBP11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 PATL1Q86TB9 770 aaKnown RBP11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 SLC26A11Q86WA9 606 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 NT5DC4Q86YG4 428 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 PQLC1Q8N2U9 271 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 ANLNQ9NQW6 1124 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 TMEM39AQ9NV64 488 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 IPPQ9Y573 584 aa11.44□□□□□ -0.58
RPRD1B-201ENST00000373433 PABPN1LA6NDY0 278 aaKnown RBP11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 PEX1O43933 1283 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 CCNT2O60583 730 aaKnown RBP11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 STAMBPO95630 424 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 ASS1P00966 412 aaKnown RBP11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 FAM58BPP0C7Q3 252 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 NAA20P61599 178 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 SLC10A6Q3KNW5 377 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 DRICH1Q6PGQ1 229 aaPredicted RBP11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 UNC45BQ8IWX7 931 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 NUP93Q8N1F7 819 aa11.43□□□□□ -0.58
RPRD1B-201ENST00000373433 DIS3LQ8TF46 1054 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms