RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 ZSCAN18Q8TBC5 510 aaPredicted RBP6.71□□□□□ -1.33
CHD6-203ENST00000373233 C9orf72Q96LT7 481 aa6.71□□□□□ -1.33
CHD6-203ENST00000373233 FAM111AQ96PZ2 611 aa6.71□□□□□ -1.33
CHD6-203ENST00000373233 KLF6Q99612 283 aaPredicted RBP6.71□□□□□ -1.33
CHD6-203ENST00000373233 SMAD5Q99717 465 aaKnown RBP6.71□□□□□ -1.33
CHD6-203ENST00000373233 LMCD1Q9NZU5 365 aa6.71□□□□□ -1.33
CHD6-203ENST00000373233 FAM186AA6NE01 2351 aa6.71□□□□□ -1.33
CHD6-203ENST00000373233 ABCB1P08183 1280 aaPredicted RBP6.71□□□□□ -1.33
CHD6-203ENST00000373233 GNG2P59768 71 aa6.71□□□□□ -1.33
CHD6-203ENST00000373233 KCNT1Q5JUK3 1230 aa6.71□□□□□ -1.33
CHD6-203ENST00000373233 TEPSINQ96N21 525 aa6.71□□□□□ -1.33
CHD6-203ENST00000373233 ARPC5LQ9BPX5 153 aa6.71□□□□□ -1.33
CHD6-203ENST00000373233 ANAPC7Q9UJX3 599 aa6.71□□□□□ -1.33
CHD6-203ENST00000373233 RPTORQ8N122 1335 aa6.71□□□□□ -1.33
CHD6-203ENST00000373233 GREB1LQ9C091 1923 aaPredicted RBP6.71□□□□□ -1.33
CHD6-203ENST00000373233 ITIH1P19827 911 aa6.71□□□□□ -1.33
CHD6-203ENST00000373233 PSMA2P25787 234 aa6.71□□□□□ -1.33
CHD6-203ENST00000373233 SRP54P61011 504 aaKnown RBP6.71□□□□□ -1.33
CHD6-203ENST00000373233 FKBP1BP68106 108 aa6.71□□□□□ -1.33
CHD6-203ENST00000373233 POU5F1BQ06416 359 aa6.71□□□□□ -1.33
CHD6-203ENST00000373233 ITKQ08881 620 aa6.71□□□□□ -1.33
CHD6-203ENST00000373233 SPDYE7PQ495Y7 208 aa6.71□□□□□ -1.33
CHD6-203ENST00000373233 SLC45A4Q5BKX6 768 aa6.71□□□□□ -1.33
CHD6-203ENST00000373233 CELF3Q5SZQ8 465 aaKnown RBP6.71□□□□□ -1.33
CHD6-203ENST00000373233 ZNF544Q6NX49 715 aa6.71□□□□□ -1.33
CHD6-203ENST00000373233 KRT35Q92764 455 aa6.71□□□□□ -1.33
CHD6-203ENST00000373233 FAXDC2Q96IV6 333 aa6.71□□□□□ -1.33
CHD6-203ENST00000373233 MAF1Q9H063 256 aa6.71□□□□□ -1.33
CHD6-203ENST00000373233 CNOT8Q9UFF9 292 aaKnown RBP6.71□□□□□ -1.33
CHD6-203ENST00000373233 RTN2O75298 545 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 CYP2C9P11712 490 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 UQCRBP14927 111 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 CLCN3P51790 818 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 ITGA1P56199 1179 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 TMEM62Q0P6H9 643 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 ARL13BQ3SXY8 428 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 ANKDD1AQ495B1 522 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 DGKKQ5KSL6 1271 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 P3H2Q8IVL5 708 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 PM20D2Q8IYS1 436 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 EIF1ADQ8N9N8 165 aaKnown RBP6.71□□□□□ -1.34
CHD6-203ENST00000373233 E2F7Q96AV8 911 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 TSPAN1O60635 241 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 GABBR2O75899 941 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 CCNE2O96020 404 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 DRD4P21917 467 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 SSTR3P32745 418 aaPredicted RBP6.71□□□□□ -1.34
CHD6-203ENST00000373233 HOXD12P35452 270 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 LRRC8DQ7L1W4 858 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 PRUNE1Q86TP1 453 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 BBS7Q8IWZ6 715 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 ELMOD2Q8IZ81 293 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 ZBED3Q96IU2 234 aaPredicted RBP6.71□□□□□ -1.34
CHD6-203ENST00000373233 M0QYV0 167 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 NOL4O94818 638 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 GLI1P08151 1106 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 ATP6V1B2P21281 511 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 SLC26A2P50443 739 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 GRIK3Q13003 919 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 RBBP7Q16576 425 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 RBM20Q5T481 1227 aaKnown RBP6.71□□□□□ -1.34
CHD6-203ENST00000373233 POLNQ7Z5Q5 900 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 ACTRT1Q8TDG2 376 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 SENP7Q9BQF6 1050 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 KATNAL1Q9BW62 490 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 TUBGCP4Q9UGJ1 667 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 IGLV3-22A0A075B6J6 115 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 HUS1O60921 280 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 ASLP04424 464 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 RALBP11234 206 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 GP5P40197 560 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 ITGA8P53708 1063 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 GEMIN4P57678 1058 aaKnown RBP6.71□□□□□ -1.34
CHD6-203ENST00000373233 FIGNQ5HY92 759 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 MIIPQ5JXC2 388 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 NIPAL1Q6NVV3 410 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 RAET1EQ8TD07 263 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 CELF4Q9BZC1 486 aaKnown RBP6.71□□□□□ -1.34
CHD6-203ENST00000373233 PRPSAP2O60256 369 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 UPP2O95045 317 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 XPAP23025 273 aaPredicted RBP6.71□□□□□ -1.34
CHD6-203ENST00000373233 C12orf50Q8NA57 414 aaPredicted RBP6.71□□□□□ -1.34
CHD6-203ENST00000373233 SMYD1Q8NB12 490 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 PHF12Q96QT6 1004 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 ZSCAN32Q9NX65 697 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 MAGED2Q9UNF1 606 aaPredicted RBP6.71□□□□□ -1.34
CHD6-203ENST00000373233 ERVK-11Q9UQG0 969 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 PARNO95453 639 aaKnown RBP6.71□□□□□ -1.34
CHD6-203ENST00000373233 CRYZL1O95825 349 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 NPR3P17342 541 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 NFIL3Q16649 462 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 ANKS6Q68DC2 871 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 AAGABQ6PD74 315 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 BHLHB9Q6PI77 547 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 GOLM1Q8NBJ4 401 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 SGF29Q96ES7 293 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 CLK4Q9HAZ1 481 aaKnown RBP6.71□□□□□ -1.34
CHD6-203ENST00000373233 DYRK4Q9NR20 520 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 MAPRE3Q9UPY8 281 aa6.71□□□□□ -1.34
CHD6-203ENST00000373233 RIPK3Q9Y572 518 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms