RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.04□□□□□ -0.32
CTPS1-202ENST00000372621 APPL2Q8NEU8 664 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 FAM149B1Q96BN6 582 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 TUBGCP5Q96RT8 1024 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 EBF3Q9H4W6 596 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 CASS4Q9NQ75 786 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 CDY2AQ9Y6F7 541 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 CDY1Q9Y6F8 540 aa13.04□□□□□ -0.32
CTPS1-202ENST00000372621 UNCXA6NJT0 531 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 TMEM114B3SHH9 223 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 FAM72CH0Y354 149 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 KCNK1O00180 336 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 PDE5AO76074 875 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 SNAI1O95863 264 aaPredicted RBP13.03□□□□□ -0.32
CTPS1-202ENST00000372621 MMP3P08254 477 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 PIM1P11309 404 aaPredicted RBP13.03□□□□□ -0.32
CTPS1-202ENST00000372621 NDUFV1P49821 464 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 GTF2A2P52657 109 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 C11orf91Q3C1V1 193 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 SLC9B1Q4ZJI4 515 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 FAM72AQ5TYM5 149 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 FAM72DQ6L9T8 149 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 EP400NLQ6ZTU2 488 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 OSTM1Q86WC4 334 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 FAM72BQ86X60 149 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 NME8Q8N427 588 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 B3GALNT2Q8NCR0 500 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 MAPK15Q8TD08 544 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 KCTD13Q8WZ19 329 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 AZIN2Q96A70 460 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 OPTNQ96CV9 577 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 DDX50Q9BQ39 737 aaKnown RBP13.03□□□□□ -0.32
CTPS1-202ENST00000372621 SHCBP1LQ9BZQ2 653 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 FAM192AQ9GZU8 254 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 ANLNQ9NQW6 1124 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 ADARB2Q9NS39 739 aaKnown RBP13.03□□□□□ -0.32
CTPS1-202ENST00000372621 SETD4Q9NVD3 440 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 VANGL2Q9ULK5 521 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 TBC1D30Q9Y2I9 924 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 I6L893 689 aaPredicted RBP13.03□□□□□ -0.32
CTPS1-202ENST00000372621 M0QYT0 321 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 EEF2KO00418 725 aaKnown RBP13.03□□□□□ -0.32
CTPS1-202ENST00000372621 DCXO43602 365 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 RNASEH1O60930 286 aaKnown RBP13.03□□□□□ -0.32
CTPS1-202ENST00000372621 MPOP05164 745 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 NCF2P19878 526 aaPredicted RBP13.03□□□□□ -0.32
CTPS1-202ENST00000372621 GLDCP23378 1020 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 PNPLA4P41247 253 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 EPHB1P54762 984 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 IRF9Q00978 393 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 SOX4Q06945 474 aaPredicted RBP13.03□□□□□ -0.32
CTPS1-202ENST00000372621 MSLNQ13421 630 aaPredicted RBP13.03□□□□□ -0.32
CTPS1-202ENST00000372621 METTL21CQ5VZV1 264 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 DEFB107AQ8IZN7 70 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 FBXW8Q8N3Y1 598 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 ZNF669Q96BR6 464 aaPredicted RBP13.03□□□□□ -0.32
CTPS1-202ENST00000372621 ZNF560Q96MR9 790 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 SGIP1Q9BQI5 828 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 CCDC28BQ9BUN5 200 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.03□□□□□ -0.32
CTPS1-202ENST00000372621 GINS2Q9Y248 185 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 FNDC1Q4ZHG4 1894 aaPredicted RBP13.03□□□□□ -0.32
CTPS1-202ENST00000372621 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.03□□□□□ -0.32
CTPS1-202ENST00000372621 FYNP06241 537 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 F7P08709 466 aaPredicted RBP13.03□□□□□ -0.32
CTPS1-202ENST00000372621 COX4I1P13073 169 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 MTTPP55157 894 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 ASPHQ12797 758 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 PEX6Q13608 980 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 ANKRD20A4Q4UJ75 823 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 SFT2D3Q587I9 215 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 HFE2Q6ZVN8 426 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 HPS6Q86YV9 775 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 ZFAND2BQ8WV99 257 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 WNT8BQ93098 351 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 TNIP3Q96KP6 325 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 SLC9A7Q96T83 725 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 RAD54BQ9Y620 910 aa13.03□□□□□ -0.32
CTPS1-202ENST00000372621 SYNJ2BP-COX16A0A087WUM0 186 aa13.02□□□□□ -0.32
CTPS1-202ENST00000372621 A0A096LPK6 155 aa13.02□□□□□ -0.32
CTPS1-202ENST00000372621 LOC100653049A0A140TA62 436 aa13.02□□□□□ -0.32
CTPS1-202ENST00000372621 H3BNX3 289 aa13.02□□□□□ -0.32
CTPS1-202ENST00000372621 CASQ2O14958 399 aaPredicted RBP13.02□□□□□ -0.32
CTPS1-202ENST00000372621 USP12O75317 370 aa13.02□□□□□ -0.32
CTPS1-202ENST00000372621 KRT34O76011 436 aa13.02□□□□□ -0.32
CTPS1-202ENST00000372621 AMHP03971 560 aa13.02□□□□□ -0.32
CTPS1-202ENST00000372621 KCNE1P15382 129 aa13.02□□□□□ -0.32
CTPS1-202ENST00000372621 NPR3P17342 541 aa13.02□□□□□ -0.32
CTPS1-202ENST00000372621 SMPD1P17405 629 aa13.02□□□□□ -0.32
CTPS1-202ENST00000372621 ERCC2P18074 760 aa13.02□□□□□ -0.32
CTPS1-202ENST00000372621 CYP2B6P20813 491 aa13.02□□□□□ -0.32
CTPS1-202ENST00000372621 WARSP23381 471 aaKnown RBP13.02□□□□□ -0.32
CTPS1-202ENST00000372621 CD68P34810 354 aaPredicted RBP13.02□□□□□ -0.32
CTPS1-202ENST00000372621 TAF6P49848 677 aa13.02□□□□□ -0.32
CTPS1-202ENST00000372621 XIAPP98170 497 aa13.02□□□□□ -0.32
CTPS1-202ENST00000372621 PPIDQ08752 370 aaKnown RBP13.02□□□□□ -0.32
CTPS1-202ENST00000372621 PCBP1Q15365 356 aaKnown RBP eCLIP13.02□□□□□ -0.32
CTPS1-202ENST00000372621 DLG2Q15700 870 aa13.02□□□□□ -0.32
CTPS1-202ENST00000372621 ACAD11Q709F0 780 aa13.02□□□□□ -0.32
CTPS1-202ENST00000372621 KBTBD6Q86V97 674 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms