RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 TBX18O95935 607 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 KRT4P19013 534 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 TUFMP49411 452 aaKnown RBP25.58■■□□□ 1.69
CTSA-203ENST00000372459 SESN2P58004 480 aaPredicted RBP25.58■■□□□ 1.69
CTSA-203ENST00000372459 NUGGCQ68CJ6 796 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 PPM1NQ8N819 430 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 TOP1MTQ969P6 601 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 GORASP1Q9BQQ3 440 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 NAT9Q9BTE0 207 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 VN1R3Q9BXE9 311 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 FNIP2Q9P278 1114 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 ZNF180Q9UJW8 692 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 SHROOM3Q8TF72 1996 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 ARHGAP42A6NI28 874 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 JCHAINP01591 159 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 ZDHHC11BP0C7U3 371 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 ATF6P18850 670 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 OR1D2P34982 312 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 QPCTQ16769 361 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 STEAP4Q687X5 459 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 CYS1Q717R9 158 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 MIB1Q86YT6 1006 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 GDAP1Q8TB36 358 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 ZSCAN18Q8TBC5 510 aaPredicted RBP25.58■■□□□ 1.69
CTSA-203ENST00000372459 ALKBH8Q96BT7 664 aaKnown RBP25.58■■□□□ 1.69
CTSA-203ENST00000372459 BTN2A3PQ96KV6 586 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 SLC39A8Q9C0K1 460 aa25.58■■□□□ 1.69
CTSA-203ENST00000372459 FSBPO95073 299 aa25.57■■□□□ 1.68
CTSA-203ENST00000372459 VIMP08670 466 aaKnown RBP25.57■■□□□ 1.68
CTSA-203ENST00000372459 RPL17P18621 184 aaKnown RBP25.57■■□□□ 1.68
CTSA-203ENST00000372459 NFKB1P19838 968 aa25.57■■□□□ 1.68
CTSA-203ENST00000372459 MGAT1P26572 445 aa25.57■■□□□ 1.68
CTSA-203ENST00000372459 IL9RQ01113 521 aa25.57■■□□□ 1.68
CTSA-203ENST00000372459 MS4A13Q5J8X5 152 aa25.57■■□□□ 1.68
CTSA-203ENST00000372459 LRRC34Q8IZ02 419 aa25.57■■□□□ 1.68
CTSA-203ENST00000372459 TTLL2Q9BWV7 592 aa25.57■■□□□ 1.68
CTSA-203ENST00000372459 MPP6Q9NZW5 540 aa25.57■■□□□ 1.68
CTSA-203ENST00000372459 MAGED2Q9UNF1 606 aaPredicted RBP25.57■■□□□ 1.68
CTSA-203ENST00000372459 TYROBPO43914 113 aa25.56■■□□□ 1.68
CTSA-203ENST00000372459 PGAM1P18669 254 aa25.56■■□□□ 1.68
CTSA-203ENST00000372459 SPARCL1Q14515 664 aa25.56■■□□□ 1.68
CTSA-203ENST00000372459 PRPSAP1Q14558 356 aa25.56■■□□□ 1.68
CTSA-203ENST00000372459 GKAP1Q5VSY0 366 aaPredicted RBP25.56■■□□□ 1.68
CTSA-203ENST00000372459 AFMIDQ63HM1 303 aa25.56■■□□□ 1.68
CTSA-203ENST00000372459 C6orf89Q6UWU4 347 aa25.56■■□□□ 1.68
CTSA-203ENST00000372459 ARHGAP36Q6ZRI8 547 aa25.56■■□□□ 1.68
CTSA-203ENST00000372459 LRRC49Q8IUZ0 686 aa25.56■■□□□ 1.68
CTSA-203ENST00000372459 ANKLE1Q8NAG6 615 aa25.56■■□□□ 1.68
CTSA-203ENST00000372459 DENND1AQ8TEH3 1009 aa25.56■■□□□ 1.68
CTSA-203ENST00000372459 TRIM56Q9BRZ2 755 aaKnown RBP25.56■■□□□ 1.68
CTSA-203ENST00000372459 UBE2OQ9C0C9 1292 aaKnown RBP25.56■■□□□ 1.68
CTSA-203ENST00000372459 NSRP1Q9H0G5 558 aaKnown RBP25.56■■□□□ 1.68
CTSA-203ENST00000372459 DONSONQ9NYP3 566 aa25.56■■□□□ 1.68
CTSA-203ENST00000372459 PPARGC1AQ9UBK2 798 aaKnown RBP25.56■■□□□ 1.68
CTSA-203ENST00000372459 VANGL2Q9ULK5 521 aa25.56■■□□□ 1.68
CTSA-203ENST00000372459 SLC12A8A0AV02 714 aa25.56■■□□□ 1.68
CTSA-203ENST00000372459 FAM159BA6NKW6 160 aa25.56■■□□□ 1.68
CTSA-203ENST00000372459 CXorf49A8MYA2 514 aaPredicted RBP25.56■■□□□ 1.68
CTSA-203ENST00000372459 MT-ND3P03897 115 aa25.56■■□□□ 1.68
CTSA-203ENST00000372459 SOD2P04179 222 aa25.56■■□□□ 1.68
CTSA-203ENST00000372459 CCNB1P14635 433 aa25.56■■□□□ 1.68
CTSA-203ENST00000372459 CA4P22748 312 aa25.56■■□□□ 1.68
CTSA-203ENST00000372459 ACBD5Q5T8D3 534 aaPredicted RBP25.56■■□□□ 1.68
CTSA-203ENST00000372459 LGSNQ5TDP6 509 aa25.56■■□□□ 1.68
CTSA-203ENST00000372459 TTC39BQ5VTQ0 682 aaPredicted RBP25.56■■□□□ 1.68
CTSA-203ENST00000372459 KCTD11Q693B1 232 aa25.56■■□□□ 1.68
CTSA-203ENST00000372459 TIGD7Q6NT04 549 aaPredicted RBP25.56■■□□□ 1.68
CTSA-203ENST00000372459 ZNF689Q96CS4 500 aaPredicted RBP25.56■■□□□ 1.68
CTSA-203ENST00000372459 NDFIP2Q9NV92 336 aa25.56■■□□□ 1.68
CTSA-203ENST00000372459 PIH1D1Q9NWS0 290 aaKnown RBP25.56■■□□□ 1.68
CTSA-203ENST00000372459 COL4A6Q14031 1691 aa25.55■■□□□ 1.68
CTSA-203ENST00000372459 C2CD2LO14523 706 aa25.55■■□□□ 1.68
CTSA-203ENST00000372459 MAFKO60675 156 aa25.55■■□□□ 1.68
CTSA-203ENST00000372459 KPNA1P52294 538 aaPredicted RBP25.55■■□□□ 1.68
CTSA-203ENST00000372459 ZNF683Q8IZ20 524 aa25.55■■□□□ 1.68
CTSA-203ENST00000372459 ARNTL2Q8WYA1 636 aa25.55■■□□□ 1.68
CTSA-203ENST00000372459 MAGEB18Q96M61 343 aa25.55■■□□□ 1.68
CTSA-203ENST00000372459 ZNF558Q96NG5 402 aa25.55■■□□□ 1.68
CTSA-203ENST00000372459 CDK5RAP1Q96SZ6 601 aaKnown RBP25.55■■□□□ 1.68
CTSA-203ENST00000372459 ZYG11BQ9C0D3 744 aa25.55■■□□□ 1.68
CTSA-203ENST00000372459 C11orf49Q9H6J7 331 aa25.55■■□□□ 1.68
CTSA-203ENST00000372459 PRDM5Q9NQX1 630 aaPredicted RBP25.55■■□□□ 1.68
CTSA-203ENST00000372459 MOCS1Q9NZB8 636 aa25.55■■□□□ 1.68
CTSA-203ENST00000372459 AFF4Q9UHB7 1163 aaKnown RBP25.55■■□□□ 1.68
CTSA-203ENST00000372459 MATN3O15232 486 aa25.55■■□□□ 1.68
CTSA-203ENST00000372459 PSMD3O43242 534 aa25.55■■□□□ 1.68
CTSA-203ENST00000372459 TLR5O60602 858 aa25.55■■□□□ 1.68
CTSA-203ENST00000372459 IGLV3-27P01718 113 aa25.55■■□□□ 1.68
CTSA-203ENST00000372459 RHOQP17081 205 aa25.55■■□□□ 1.68
CTSA-203ENST00000372459 RPA3P35244 121 aaPredicted RBP25.55■■□□□ 1.68
CTSA-203ENST00000372459 GJA8P48165 433 aa25.55■■□□□ 1.68
CTSA-203ENST00000372459 CRADDP78560 199 aa25.55■■□□□ 1.68
CTSA-203ENST00000372459 RING1Q06587 406 aa25.55■■□□□ 1.68
CTSA-203ENST00000372459 TRMT10BQ6PF06 316 aaKnown RBP25.55■■□□□ 1.68
CTSA-203ENST00000372459 OR52K1Q8NGK4 314 aa25.55■■□□□ 1.68
CTSA-203ENST00000372459 MLPHQ9BV36 600 aaPredicted RBP25.55■■□□□ 1.68
CTSA-203ENST00000372459 SMYD2Q9NRG4 433 aa25.55■■□□□ 1.68
CTSA-203ENST00000372459 SYBUQ9NX95 663 aa25.55■■□□□ 1.68
CTSA-203ENST00000372459 LTBP2Q14767 1821 aa25.54■■□□□ 1.68
CTSA-203ENST00000372459 KRT37O76014 449 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms