RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 STK40Q8N2I9 435 aa15.01□□□□□ -0.01
NDC1-201ENST00000371429 OSCP1Q8WVF1 389 aa15.01□□□□□ -0.01
NDC1-201ENST00000371429 CLEC4DQ8WXI8 215 aa15.01□□□□□ -0.01
NDC1-201ENST00000371429 FAM84AQ96KN4 292 aa15.01□□□□□ -0.01
NDC1-201ENST00000371429 RAB23Q9ULC3 237 aa15.01□□□□□ -0.01
NDC1-201ENST00000371429 LRRC36Q1X8D7 754 aa15.01□□□□□ -0.01
NDC1-201ENST00000371429 B4GALNT2Q8NHY0 566 aa15.01□□□□□ -0.01
NDC1-201ENST00000371429 C10orf88Q9H8K7 445 aa15.01□□□□□ -0.01
NDC1-201ENST00000371429 BRD9Q9H8M2 597 aa15.01□□□□□ -0.01
NDC1-201ENST00000371429 PARVBQ9HBI1 364 aa15.01□□□□□ -0.01
NDC1-201ENST00000371429 SAE1Q9UBE0 346 aaPredicted RBP15.01□□□□□ -0.01
NDC1-201ENST00000371429 PADI4Q9UM07 663 aa15.01□□□□□ -0.01
NDC1-201ENST00000371429 NFAT5O94916 1531 aa15.01□□□□□ -0.01
NDC1-201ENST00000371429 A0A0A0MRY4 1105 aa15.01□□□□□ -0.01
NDC1-201ENST00000371429 CPSF4O95639 269 aaKnown RBP15.01□□□□□ -0.01
NDC1-201ENST00000371429 HOXB8P17481 243 aaPredicted RBP15.01□□□□□ -0.01
NDC1-201ENST00000371429 FMO4P31512 558 aa15.01□□□□□ -0.01
NDC1-201ENST00000371429 METTL3Q86U44 580 aaKnown RBP15.01□□□□□ -0.01
NDC1-201ENST00000371429 LRRC49Q8IUZ0 686 aa15.01□□□□□ -0.01
NDC1-201ENST00000371429 SPATA13Q96N96 652 aa15.01□□□□□ -0.01
NDC1-201ENST00000371429 NLNQ9BYT8 704 aa15.01□□□□□ -0.01
NDC1-201ENST00000371429 CHST7Q9NS84 486 aa15.01□□□□□ -0.01
NDC1-201ENST00000371429 KATNA1O75449 491 aa15□□□□□ -0.01
NDC1-201ENST00000371429 NEPROQ6NW34 567 aa15□□□□□ -0.01
NDC1-201ENST00000371429 VSTM1Q6UX27 236 aa15□□□□□ -0.01
NDC1-201ENST00000371429 PSTKQ8IV42 348 aaKnown RBP15□□□□□ -0.01
NDC1-201ENST00000371429 C12orf56Q8IXR9 622 aa15□□□□□ -0.01
NDC1-201ENST00000371429 MIR1-1HGQ9H1L0 117 aa15□□□□□ -0.01
NDC1-201ENST00000371429 A0A096LPK6 155 aa15□□□□□ -0.01
NDC1-201ENST00000371429 TMEM114B3SHH9 223 aa15□□□□□ -0.01
NDC1-201ENST00000371429 WNT7AO00755 349 aa15□□□□□ -0.01
NDC1-201ENST00000371429 CCNB1P14635 433 aa15□□□□□ -0.01
NDC1-201ENST00000371429 TYMPP19971 482 aa15□□□□□ -0.01
NDC1-201ENST00000371429 SERPINB5P36952 375 aa15□□□□□ -0.01
NDC1-201ENST00000371429 ALDH9A1P49189 494 aa15□□□□□ -0.01
NDC1-201ENST00000371429 NOMO3P69849 1222 aa15□□□□□ -0.01
NDC1-201ENST00000371429 FMO1Q01740 532 aa15□□□□□ -0.01
NDC1-201ENST00000371429 ATAT1Q5SQI0 421 aa15□□□□□ -0.01
NDC1-201ENST00000371429 GPR158Q5T848 1215 aa15□□□□□ -0.01
NDC1-201ENST00000371429 PHF13Q86YI8 300 aaPredicted RBP15□□□□□ -0.01
NDC1-201ENST00000371429 ZBTB10Q96DT7 871 aa15□□□□□ -0.01
NDC1-201ENST00000371429 RAD18Q9NS91 495 aa15□□□□□ -0.01
NDC1-201ENST00000371429 HEY2Q9UBP5 337 aa15□□□□□ -0.01
NDC1-201ENST00000371429 CRYL1Q9Y2S2 319 aa15□□□□□ -0.01
NDC1-201ENST00000371429 AP5Z1O43299 807 aa15□□□□□ -0.01
NDC1-201ENST00000371429 ADH1CP00326 375 aa15□□□□□ -0.01
NDC1-201ENST00000371429 CYP1A1P04798 512 aaPredicted RBP15□□□□□ -0.01
NDC1-201ENST00000371429 RPL21P46778 160 aaKnown RBP15□□□□□ -0.01
NDC1-201ENST00000371429 TAF10Q12962 218 aa15□□□□□ -0.01
NDC1-201ENST00000371429 TBX2Q13207 712 aaPredicted RBP15□□□□□ -0.01
NDC1-201ENST00000371429 MIIPQ5JXC2 388 aa15□□□□□ -0.01
NDC1-201ENST00000371429 LRRC34Q8IZ02 419 aa15□□□□□ -0.01
NDC1-201ENST00000371429 CPNE1Q99829 537 aa15□□□□□ -0.01
NDC1-201ENST00000371429 SEMA3CQ99985 751 aa15□□□□□ -0.01
NDC1-201ENST00000371429 EIF2AQ9BY44 585 aaKnown RBP15□□□□□ -0.01
NDC1-201ENST00000371429 DHX33Q9H6R0 707 aaKnown RBP15□□□□□ -0.01
NDC1-201ENST00000371429 EFCAB1Q9HAE3 211 aa15□□□□□ -0.01
NDC1-201ENST00000371429 AASDHPPTQ9NRN7 309 aa15□□□□□ -0.01
NDC1-201ENST00000371429 ADAM28Q9UKQ2 775 aa15□□□□□ -0.01
NDC1-201ENST00000371429 MAFBQ9Y5Q3 323 aaPredicted RBP15□□□□□ -0.01
NDC1-201ENST00000371429 CES2O00748 559 aa15□□□□□ -0.01
NDC1-201ENST00000371429 HNRNPRO43390 633 aaKnown RBP15□□□□□ -0.01
NDC1-201ENST00000371429 MT-CO1P00395 513 aa15□□□□□ -0.01
NDC1-201ENST00000371429 CATP04040 527 aaKnown RBP15□□□□□ -0.01
NDC1-201ENST00000371429 THRAP10827 490 aa15□□□□□ -0.01
NDC1-201ENST00000371429 ATP4AP20648 1035 aa15□□□□□ -0.01
NDC1-201ENST00000371429 PSMB4P28070 264 aa15□□□□□ -0.01
NDC1-201ENST00000371429 IRAK1P51617 712 aa15□□□□□ -0.01
NDC1-201ENST00000371429 KCNMA1Q12791 1236 aa15□□□□□ -0.01
NDC1-201ENST00000371429 ATP6AP1LQ52LC2 224 aa15□□□□□ -0.01
NDC1-201ENST00000371429 FAM46CQ5VWP2 391 aa15□□□□□ -0.01
NDC1-201ENST00000371429 PARP9Q8IXQ6 854 aa15□□□□□ -0.01
NDC1-201ENST00000371429 FBXO22Q8NEZ5 403 aa15□□□□□ -0.01
NDC1-201ENST00000371429 RSPH1Q8WYR4 309 aa15□□□□□ -0.01
NDC1-201ENST00000371429 ASB8Q9H765 288 aa15□□□□□ -0.01
NDC1-201ENST00000371429 ZNF214Q9UL59 606 aaPredicted RBP15□□□□□ -0.01
NDC1-201ENST00000371429 NAALADL1Q9UQQ1 740 aa15□□□□□ -0.01
NDC1-201ENST00000371429 PHLPP1O60346 1717 aa15□□□□□ -0.01
NDC1-201ENST00000371429 PDE2AO00408 941 aaPredicted RBP14.99□□□□□ -0.01
NDC1-201ENST00000371429 BTN3A1O00481 513 aa14.99□□□□□ -0.01
NDC1-201ENST00000371429 CYP1A2P05177 515 aa14.99□□□□□ -0.01
NDC1-201ENST00000371429 OR4Q2P0C623 313 aa14.99□□□□□ -0.01
NDC1-201ENST00000371429 TFE3P19532 575 aaPredicted RBP14.99□□□□□ -0.01
NDC1-201ENST00000371429 CYTH1Q15438 398 aa14.99□□□□□ -0.01
NDC1-201ENST00000371429 N4BP2L1Q5TBK1 243 aaPredicted RBP14.99□□□□□ -0.01
NDC1-201ENST00000371429 KRT78Q8N1N4 520 aa14.99□□□□□ -0.01
NDC1-201ENST00000371429 RNF157Q96PX1 679 aa14.99□□□□□ -0.01
NDC1-201ENST00000371429 PRDM12Q9H4Q4 367 aa14.99□□□□□ -0.01
NDC1-201ENST00000371429 NRDE2Q9H7Z3 1164 aa14.99□□□□□ -0.01
NDC1-201ENST00000371429 CERS4Q9HA82 394 aa14.99□□□□□ -0.01
NDC1-201ENST00000371429 KRT20P35900 424 aa14.99□□□□□ -0.01
NDC1-201ENST00000371429 PFKPQ01813 784 aa14.99□□□□□ -0.01
NDC1-201ENST00000371429 TNFRSF25Q93038 417 aa14.99□□□□□ -0.01
NDC1-201ENST00000371429 IL22Q9GZX6 179 aa14.99□□□□□ -0.01
NDC1-201ENST00000371429 CATSPERZQ9NTU4 200 aa14.99□□□□□ -0.01
NDC1-201ENST00000371429 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.99□□□□□ -0.012e-6■■■■■ 27.2
NDC1-201ENST00000371429 POLG2Q9UHN1 485 aa14.99□□□□□ -0.01
NDC1-201ENST00000371429 ZMYND8Q9ULU4 1186 aaPredicted RBP14.99□□□□□ -0.01
NDC1-201ENST00000371429 TBC1D4O60343 1298 aa14.99□□□□□ -0.01
NDC1-201ENST00000371429 TSPAN1O60635 241 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms