RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 NFU1Q9UMS0 254 aa15.46■□□□□ 0.07
LMO4-201ENST00000370542 PLAAQ9Y263 795 aa15.46■□□□□ 0.07
LMO4-201ENST00000370542 FREM2Q5SZK8 3169 aa15.45■□□□□ 0.06
LMO4-201ENST00000370542 A0A1W2PQF6 199 aa15.45■□□□□ 0.06
LMO4-201ENST00000370542 LNP1A1A4G5 178 aa15.45■□□□□ 0.06
LMO4-201ENST00000370542 SLC16A3O15427 465 aaKnown RBP15.45■□□□□ 0.06
LMO4-201ENST00000370542 STC2O76061 302 aa15.45■□□□□ 0.06
LMO4-201ENST00000370542 TYRP14679 529 aa15.45■□□□□ 0.06
LMO4-201ENST00000370542 CD58P19256 250 aa15.45■□□□□ 0.06
LMO4-201ENST00000370542 NTSR1P30989 418 aa15.45■□□□□ 0.06
LMO4-201ENST00000370542 GBP1P32455 592 aa15.45■□□□□ 0.06
LMO4-201ENST00000370542 SLC7A5Q01650 507 aa15.45■□□□□ 0.06
LMO4-201ENST00000370542 GUCY1A3Q02108 690 aa15.45■□□□□ 0.06
LMO4-201ENST00000370542 FOXC1Q12948 553 aa15.45■□□□□ 0.06
LMO4-201ENST00000370542 ITIH4Q14624 930 aa15.45■□□□□ 0.06
LMO4-201ENST00000370542 ASTE1Q2TB18 679 aaPredicted RBP15.45■□□□□ 0.06
LMO4-201ENST00000370542 ANO4Q32M45 955 aa15.45■□□□□ 0.06
LMO4-201ENST00000370542 ANKRD20A8PQ5CZ79 823 aa15.45■□□□□ 0.06
LMO4-201ENST00000370542 MEI1Q5TIA1 1274 aa15.45■□□□□ 0.06
LMO4-201ENST00000370542 PM20D1Q6GTS8 502 aa15.45■□□□□ 0.06
LMO4-201ENST00000370542 MIB1Q86YT6 1006 aa15.45■□□□□ 0.06
LMO4-201ENST00000370542 ZNF513Q8N8E2 541 aaPredicted RBP15.45■□□□□ 0.06
LMO4-201ENST00000370542 ANKRD52Q8NB46 1076 aa15.45■□□□□ 0.06
LMO4-201ENST00000370542 TATDN2Q93075 761 aa15.45■□□□□ 0.06
LMO4-201ENST00000370542 XPO6Q96QU8 1125 aaKnown RBP15.45■□□□□ 0.06
LMO4-201ENST00000370542 CDK5RAP1Q96SZ6 601 aaKnown RBP15.45■□□□□ 0.06
LMO4-201ENST00000370542 GABRG3Q99928 467 aa15.45■□□□□ 0.06
LMO4-201ENST00000370542 FAM114A2Q9NRY5 505 aa15.45■□□□□ 0.06
LMO4-201ENST00000370542 EVLQ9UI08 416 aaPredicted RBP15.45■□□□□ 0.06
LMO4-201ENST00000370542 TMEM59LQ9UK28 342 aa15.45■□□□□ 0.06
LMO4-201ENST00000370542 LSM7Q9UK45 103 aaKnown RBP15.45■□□□□ 0.06
LMO4-201ENST00000370542 INVSQ9Y283 1065 aa15.45■□□□□ 0.06
LMO4-201ENST00000370542 ZNF510Q9Y2H8 683 aa15.45■□□□□ 0.06
LMO4-201ENST00000370542 PI4KAP42356 2102 aa15.44■□□□□ 0.06
LMO4-201ENST00000370542 BHMG1C9JSJ3 638 aaPredicted RBP15.44■□□□□ 0.06
LMO4-201ENST00000370542 CDX4O14627 284 aaPredicted RBP15.44■□□□□ 0.06
LMO4-201ENST00000370542 PMM2O15305 246 aa15.44■□□□□ 0.06
LMO4-201ENST00000370542 TOP3BO95985 862 aaKnown RBP15.44■□□□□ 0.06
LMO4-201ENST00000370542 PENKP01210 267 aaPredicted RBP15.44■□□□□ 0.06
LMO4-201ENST00000370542 KLKB1P03952 638 aa15.44■□□□□ 0.06
LMO4-201ENST00000370542 IRF1P10914 325 aa15.44■□□□□ 0.06
LMO4-201ENST00000370542 CARSP49589 748 aaKnown RBP15.44■□□□□ 0.06
LMO4-201ENST00000370542 PMS1P54277 932 aaKnown RBP15.44■□□□□ 0.06
LMO4-201ENST00000370542 FKBP3Q00688 224 aaKnown RBP15.44■□□□□ 0.06
LMO4-201ENST00000370542 BYSLQ13895 437 aaKnown RBP15.44■□□□□ 0.06
LMO4-201ENST00000370542 CBWD6Q4V339 395 aa15.44■□□□□ 0.06
LMO4-201ENST00000370542 CBWD3Q5JTY5 395 aa15.44■□□□□ 0.06
LMO4-201ENST00000370542 CBWD5Q5RIA9 395 aa15.44■□□□□ 0.06
LMO4-201ENST00000370542 RNF43Q68DV7 783 aa15.44■□□□□ 0.06
LMO4-201ENST00000370542 ANKRD40Q6AI12 368 aa15.44■□□□□ 0.06
LMO4-201ENST00000370542 GRAMD4Q6IC98 578 aa15.44■□□□□ 0.06
LMO4-201ENST00000370542 HOOK3Q86VS8 718 aa15.44■□□□□ 0.06
LMO4-201ENST00000370542 UBR7Q8N806 425 aa15.44■□□□□ 0.06
LMO4-201ENST00000370542 ACTRT1Q8TDG2 376 aa15.44■□□□□ 0.06
LMO4-201ENST00000370542 CASKIN2Q8WXE0 1202 aa15.44■□□□□ 0.06
LMO4-201ENST00000370542 N4BP2L2Q92802 583 aaPredicted RBP15.44■□□□□ 0.06
LMO4-201ENST00000370542 EEF2KMTQ96G04 330 aa15.44■□□□□ 0.06
LMO4-201ENST00000370542 HEXIM2Q96MH2 286 aaKnown RBP15.44■□□□□ 0.06
LMO4-201ENST00000370542 BBS2Q9BXC9 721 aa15.44■□□□□ 0.06
LMO4-201ENST00000370542 ZDHHC4Q9NPG8 344 aa15.44■□□□□ 0.06
LMO4-201ENST00000370542 NAGPAQ9UK23 515 aa15.44■□□□□ 0.06
LMO4-201ENST00000370542 SLC27A6Q9Y2P4 619 aa15.44■□□□□ 0.06
LMO4-201ENST00000370542 BZW2Q9Y6E2 419 aaKnown RBP15.44■□□□□ 0.06
LMO4-201ENST00000370542 DUSP10Q9Y6W6 482 aa15.44■□□□□ 0.06
LMO4-201ENST00000370542 TCRBV21S2A2A0A5A6 115 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 PRRT4C9JH25 899 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 GFRA2O00451 464 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 GIPC1O14908 333 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 MDM4O15151 490 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 MGRN1O60291 552 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 KRT14P02533 472 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 GLI1P08151 1106 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 RALAP11233 206 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 GABRG2P18507 467 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 COG7P83436 770 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 ENPP2Q13822 863 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 ZNF394Q53GI3 561 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 C10orf120Q5SQS8 335 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 SFMBT2Q5VUG0 894 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 BHLHA9Q7RTU4 235 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 PIGZQ86VD9 579 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 TTC30AQ86WT1 665 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 FAM217AQ8IXS0 508 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 SH2D3CQ8N5H7 860 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 FRMD1Q8N878 549 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 RLN3Q8WXF3 142 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 IFT81Q8WYA0 676 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 SLC35C1Q96A29 364 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 SEC16BQ96JE7 1060 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 EDEM2Q9BV94 578 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 SCNM1Q9BWG6 230 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 NSRP1Q9H0G5 558 aaKnown RBP15.43■□□□□ 0.06
LMO4-201ENST00000370542 STMN4Q9H169 189 aaPredicted RBP15.43■□□□□ 0.06
LMO4-201ENST00000370542 MMRN2Q9H8L6 949 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 DNAJC17Q9NVM6 304 aaKnown RBP15.43■□□□□ 0.06
LMO4-201ENST00000370542 SLC12A6Q9UHW9 1150 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 NUDT5Q9UKK9 219 aa15.43■□□□□ 0.06
LMO4-201ENST00000370542 ASCC3Q8N3C0 2202 aaKnown RBP15.42■□□□□ 0.06
LMO4-201ENST00000370542 NEDD8-MDP1E9PL57 170 aa15.42■□□□□ 0.06
LMO4-201ENST00000370542 KHNYNO15037 678 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms