RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 TIE1P35590 1138 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 HCAR3P49019 387 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 DPYSQ14117 519 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 FUT11Q495W5 492 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 C2orf27AQ580R0 203 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 ANKRD20A8PQ5CZ79 823 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 PITRM1Q5JRX3 1037 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 ZNF569Q5MCW4 686 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 C6orf118Q5T5N4 469 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 TMEM215Q68D42 235 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 MBLAC2Q68D91 279 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 RNF43Q68DV7 783 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 ZNF354CQ86Y25 554 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 CCDC50Q8IVM0 306 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 SUGP1Q8IWZ8 645 aaKnown RBP14.27□□□□□ -0.13
TPM3-211ENST00000368531 ZNF557Q8N988 423 aaPredicted RBP14.27□□□□□ -0.13
TPM3-211ENST00000368531 PJA1Q8NG27 643 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 OR7D4Q8NG98 312 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 CYB5D2Q8WUJ1 264 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 TSC1Q92574 1164 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 TRIM44Q96DX7 344 aaPredicted RBP14.27□□□□□ -0.13
TPM3-211ENST00000368531 CELF6Q96J87 481 aaKnown RBP14.27□□□□□ -0.13
TPM3-211ENST00000368531 LMLNQ96KR4 655 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 NELL2Q99435 816 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 ZNF212Q9UDV6 495 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 INTS6Q9UL03 887 aaKnown RBP14.27□□□□□ -0.13
TPM3-211ENST00000368531 TBC1D30Q9Y2I9 924 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 SLC27A6Q9Y2P4 619 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 SIT1Q9Y3P8 196 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 PCDHA3Q9Y5H8 950 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 TECTAO75443 2155 aa14.27□□□□□ -0.13
TPM3-211ENST00000368531 CCDC66A2RUB6 948 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 PI15O43692 258 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 ZRANB2O95218 330 aaKnown RBP eCLIP14.26□□□□□ -0.13
TPM3-211ENST00000368531 POLR2EP19388 210 aaKnown RBP14.26□□□□□ -0.13
TPM3-211ENST00000368531 CTNNA2P26232 953 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 HTR7P34969 479 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 CTNNA1P35221 906 aaKnown RBP14.26□□□□□ -0.13
TPM3-211ENST00000368531 TNFRSF4P43489 277 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 MAPKAPK2P49137 400 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 ZNF135P52742 658 aaPredicted RBP14.26□□□□□ -0.13
TPM3-211ENST00000368531 GNA12Q03113 381 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 KAZNQ674X7 775 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 CWF19L1Q69YN2 538 aaKnown RBP14.26□□□□□ -0.13
TPM3-211ENST00000368531 IL31Q6EBC2 164 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 MFSD7Q6UXD7 560 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 SETD3Q86TU7 594 aaPredicted RBP14.26□□□□□ -0.13
TPM3-211ENST00000368531 ADIPOR2Q86V24 386 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 RFX6Q8HWS3 928 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 CCDC105Q8IYK2 499 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 KATNAL2Q8IYT4 538 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 RCOR2Q8IZ40 523 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 AHI1Q8N157 1196 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 CCDC33Q8N5R6 958 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 UBL4BQ8N7F7 174 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 PCDH19Q8TAB3 1148 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 FAM71BQ8TC56 605 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 WFIKKN2Q8TEU8 576 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 FEM1AQ9BSK4 669 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 MAK16Q9BXY0 300 aaKnown RBP14.26□□□□□ -0.13
TPM3-211ENST00000368531 ETNK2Q9NVF9 386 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 ELOVL2Q9NXB9 296 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 VPS28Q9UK41 221 aa14.26□□□□□ -0.13
TPM3-211ENST00000368531 MYO18AQ92614 2054 aaKnown RBP14.26□□□□□ -0.13
TPM3-211ENST00000368531 SHROOM3Q8TF72 1996 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 NYNRINQ9P2P1 1898 aaKnown RBP14.25□□□□□ -0.13
TPM3-211ENST00000368531 A0A0A0MRY4 1105 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 ILVBLA1L0T0 632 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 C3orf70A6NLC5 250 aaPredicted RBP14.25□□□□□ -0.13
TPM3-211ENST00000368531 WASH4PA8MWX3 477 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 NCAM2O15394 837 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 DDX3YO15523 660 aaKnown RBP14.25□□□□□ -0.13
TPM3-211ENST00000368531 SNAP91O60641 907 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 RAMP2O60895 175 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 RNF40O75150 1001 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 KRT10P13645 584 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 GLDCP23378 1020 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 ACVRL1P37023 503 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 WASP42768 502 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 CTSOP43234 321 aaPredicted RBP14.25□□□□□ -0.13
TPM3-211ENST00000368531 OXCT1P55809 520 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 RWDD2BP57060 319 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 DYNLT1P63172 113 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 ZNF211Q13398 564 aaPredicted RBP14.25□□□□□ -0.13
TPM3-211ENST00000368531 FZD5Q13467 585 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 SLC12A1Q13621 1099 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 CCINQ13939 588 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 LRRC32Q14392 662 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 POLD3Q15054 466 aaPredicted RBP14.25□□□□□ -0.13
TPM3-211ENST00000368531 PLEKHG6Q3KR16 790 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 DGKKQ5KSL6 1271 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 EGFLAMQ63HQ2 1017 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 AADACL2Q6P093 401 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 TMCO3Q6UWJ1 677 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 SPOCD1Q6ZMY3 1216 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 Q6ZS52 159 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 KIAA0907Q7Z7F0 614 aaPredicted RBP14.25□□□□□ -0.13
TPM3-211ENST00000368531 ZNF687Q8N1G0 1237 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 NPWQ8N729 165 aa14.25□□□□□ -0.13
TPM3-211ENST00000368531 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms