RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 RASGEF1CQ8N431 466 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 LRRC15Q8TF66 581 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 ATXN2LQ8WWM7 1075 aaKnown RBP12.54□□□□□ -0.4
PTPRK-203ENST00000368207 RXFP1Q9HBX9 757 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 TCF7L2Q9NQB0 619 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 STX18Q9P2W9 335 aaKnown RBP12.54□□□□□ -0.4
PTPRK-203ENST00000368207 DOLKQ9UPQ8 538 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 NR2E1Q9Y466 385 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 MYO1GB0I1T2 1018 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 ADCY6O43306 1168 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 H2AFYO75367 372 aaKnown RBP12.54□□□□□ -0.4
PTPRK-203ENST00000368207 TAF5Q15542 800 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 AGKQ53H12 422 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 IL22Q9GZX6 179 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 DPEP3Q9H4B8 488 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 YY1AP1Q9H869 796 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 NMRAL1Q9HBL8 299 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 CD248Q9HCU0 757 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 UXTQ9UBK9 157 aaPredicted RBP12.54□□□□□ -0.4
PTPRK-203ENST00000368207 C5orf58C9J3I9 102 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 TPP1O14773 563 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 TLR5O60602 858 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 DAB1O75553 588 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 SLC25A52Q3SY17 297 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 ANKS3Q6ZW76 656 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 OTOAQ7RTW8 1153 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 TBC1D19Q8N5T2 526 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 APBB2Q92870 758 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 P2RY11Q96G91 374 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 CATSPER2Q96P56 530 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 FZD8Q9H461 694 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 ACTR8Q9H981 624 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 TAS2R13Q9NYV9 303 aa12.54□□□□□ -0.4
PTPRK-203ENST00000368207 CALB2P22676 271 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 ADRA1BP35368 520 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 BCL2L1Q07817 233 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 DUSP4Q13115 394 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 PSMD5Q16401 504 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 SPDYCQ5MJ68 293 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 CPNE8Q86YQ8 564 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 CATSPER1Q8NEC5 780 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 CERS2Q96G23 380 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 ACOX2Q99424 681 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 SEMA3CQ99985 751 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 ZYG11BQ9C0D3 744 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 THAP1Q9NVV9 213 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 DNMT3LQ9UJW3 386 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 LOC102724159A0A0B4J2E5 919 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 FAM95CA0A1B0GW59 222 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 EVPLLA8MZ36 301 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 FMO4P31512 558 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 INPP1P49441 399 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 LILRA4P59901 499 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 BOP1Q14137 746 aaKnown RBP12.53□□□□□ -0.4
PTPRK-203ENST00000368207 PWP2Q15269 919 aaKnown RBP12.53□□□□□ -0.4
PTPRK-203ENST00000368207 SCUBE1Q8IWY4 988 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 CEP70Q8NHQ1 597 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 FAM162AQ96A26 154 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 TMEM237Q96Q45 408 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 SPATS2LQ9NUQ6 558 aaKnown RBP12.53□□□□□ -0.4
PTPRK-203ENST00000368207 LRP6O75581 1613 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 LTBP4Q8N2S1 1624 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 KDM3BQ7LBC6 1761 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 NR5A2O00482 541 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 KPNA3O00505 521 aaPredicted RBP12.53□□□□□ -0.4
PTPRK-203ENST00000368207 KATNA1O75449 491 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 SOAT1P35610 550 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 CYLC2Q14093 348 aaPredicted RBP12.53□□□□□ -0.4
PTPRK-203ENST00000368207 CCDC153Q494R4 210 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 PABPC1LQ4VXU2 614 aaKnown RBP12.53□□□□□ -0.4
PTPRK-203ENST00000368207 SH3D19Q5HYK7 790 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 VPS37AQ8NEZ2 397 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 ZNF516Q92618 1163 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 CNDP1Q96KN2 507 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 ADNPQ9H2P0 1102 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 CBX6O95503 412 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 KRT16P08779 473 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 CD48P09326 243 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 GRK4P32298 578 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 CCDC15Q0P6D6 951 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 NR6A1Q15406 480 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 USP41Q3LFD5 358 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 EXOC3L1Q86VI1 746 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 FBXO39Q8N4B4 442 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 OSGEPL1Q9H4B0 414 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 TAGLN3Q9UI15 199 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 EIF3LQ9Y262 564 aaKnown RBP12.53□□□□□ -0.4
PTPRK-203ENST00000368207 COQ4Q9Y3A0 265 aa12.53□□□□□ -0.4
PTPRK-203ENST00000368207 AHDC1Q5TGY3 1603 aaPredicted RBP12.52□□□□□ -0.4
PTPRK-203ENST00000368207 MDM4O15151 490 aa12.52□□□□□ -0.4
PTPRK-203ENST00000368207 RABGGTBP53611 331 aa12.52□□□□□ -0.4
PTPRK-203ENST00000368207 NAGLUP54802 743 aa12.52□□□□□ -0.4
PTPRK-203ENST00000368207 SMAD3P84022 425 aaKnown RBP12.52□□□□□ -0.4
PTPRK-203ENST00000368207 PRKAA1Q13131 559 aa12.52□□□□□ -0.4
PTPRK-203ENST00000368207 PCID2Q5JVF3 399 aa12.52□□□□□ -0.4
PTPRK-203ENST00000368207 ARMC12Q5T9G4 340 aa12.52□□□□□ -0.4
PTPRK-203ENST00000368207 C7orf43Q8WVR3 580 aa12.52□□□□□ -0.4
PTPRK-203ENST00000368207 CSPG4P5Q96PW8 444 aa12.52□□□□□ -0.4
PTPRK-203ENST00000368207 EBNA1BP2Q99848 306 aaKnown RBP12.52□□□□□ -0.4
PTPRK-203ENST00000368207 CORO1BQ9BR76 489 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms