RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 ADAM32Q8TC27 787 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 MAGEC3Q8TD91 643 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 DQX1Q8TE96 717 aaKnown RBP14.35□□□□□ -0.11
USF1-202ENST00000368020 SPOCK2Q92563 424 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 TRIM43Q96BQ3 446 aaPredicted RBP14.35□□□□□ -0.11
USF1-202ENST00000368020 OXNAD1Q96HP4 312 aaPredicted RBP14.35□□□□□ -0.11
USF1-202ENST00000368020 KLF6Q99612 283 aaPredicted RBP14.35□□□□□ -0.11
USF1-202ENST00000368020 CPNE1Q99829 537 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 HTATIP2Q9BUP3 242 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 SAR1AQ9NR31 198 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 TMEM30AQ9NV96 361 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 ADAM28Q9UKQ2 775 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 MTO1Q9Y2Z2 717 aaKnown RBP14.35□□□□□ -0.11
USF1-202ENST00000368020 SCN5AQ14524 2016 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 SHROOM3Q8TF72 1996 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 TTC3P53804 2025 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.35□□□□□ -0.11
USF1-202ENST00000368020 FAM72CH0Y354 149 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 IRAK2O43187 625 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 MGRN1O60291 552 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 GLRA3O75311 464 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 PIAS1O75925 651 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 LRIG2O94898 1065 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 SRGAP2BP0DMP2 458 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 SLC2A3P11169 496 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 RAG1P15918 1043 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 IGFBP6P24592 240 aaPredicted RBP14.35□□□□□ -0.11
USF1-202ENST00000368020 MGAT1P26572 445 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 NRG1Q02297 640 aaPredicted RBP14.35□□□□□ -0.11
USF1-202ENST00000368020 PPP2R5DQ14738 602 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 INSCQ1MX18 579 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 TEX44Q53QW1 395 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 ACBD5Q5T8D3 534 aaPredicted RBP14.35□□□□□ -0.11
USF1-202ENST00000368020 FAM72AQ5TYM5 149 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 FAM72DQ6L9T8 149 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 TRMT10BQ6PF06 316 aaKnown RBP14.35□□□□□ -0.11
USF1-202ENST00000368020 CD300LGQ6UXG3 332 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 FAM72BQ86X60 149 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 EDEM1Q92611 657 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 INPP5DQ92835 1189 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 SCLYQ96I15 445 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 C7orf26Q96N11 449 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 TSGA13Q96PP4 275 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 SIKE1Q9BRV8 207 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 IL22Q9GZX6 179 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 SMYD2Q9NRG4 433 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 TMPRSS4Q9NRS4 437 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 NSMCE4AQ9NXX6 385 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 ZFATQ9P243 1243 aa14.35□□□□□ -0.11
USF1-202ENST00000368020 PLXNA3P51805 1871 aa14.34□□□□□ -0.11
USF1-202ENST00000368020 ALPK3Q96L96 1907 aa14.34□□□□□ -0.11
USF1-202ENST00000368020 USP1O94782 785 aa14.34□□□□□ -0.11
USF1-202ENST00000368020 OAZ2O95190 189 aa14.34□□□□□ -0.11
USF1-202ENST00000368020 NQO1P15559 274 aaKnown RBP14.34□□□□□ -0.11
USF1-202ENST00000368020 CCNCP24863 283 aa14.34□□□□□ -0.11
USF1-202ENST00000368020 HOXC13P31276 330 aa14.34□□□□□ -0.11
USF1-202ENST00000368020 SLC8A1P32418 973 aa14.34□□□□□ -0.11
USF1-202ENST00000368020 GRIA1P42261 906 aa14.34□□□□□ -0.11
USF1-202ENST00000368020 SESN2P58004 480 aaPredicted RBP14.34□□□□□ -0.11
USF1-202ENST00000368020 ELF3P78545 371 aaPredicted RBP14.34□□□□□ -0.11
USF1-202ENST00000368020 SF3A3Q12874 501 aaKnown RBP eCLIP14.34□□□□□ -0.113e-6■■■■□ 23.4
USF1-202ENST00000368020 EIF4EBP2Q13542 120 aaPredicted RBP14.34□□□□□ -0.11
USF1-202ENST00000368020 GRTP1Q5TC63 336 aa14.34□□□□□ -0.11
USF1-202ENST00000368020 RTN4RL1Q86UN2 441 aaPredicted RBP14.34□□□□□ -0.11
USF1-202ENST00000368020 NDUFAF2Q8N183 169 aa14.34□□□□□ -0.11
USF1-202ENST00000368020 TMEM199Q8N511 208 aa14.34□□□□□ -0.11
USF1-202ENST00000368020 CCDC33Q8N5R6 958 aa14.34□□□□□ -0.11
USF1-202ENST00000368020 OR10T2Q8NGX3 314 aa14.34□□□□□ -0.11
USF1-202ENST00000368020 LRRN4Q8WUT4 740 aa14.34□□□□□ -0.11
USF1-202ENST00000368020 ARNTL2Q8WYA1 636 aa14.34□□□□□ -0.11
USF1-202ENST00000368020 ERP27Q96DN0 273 aa14.34□□□□□ -0.11
USF1-202ENST00000368020 SERPINB11Q96P15 392 aa14.34□□□□□ -0.11
USF1-202ENST00000368020 FBXO44Q9H4M3 255 aa14.34□□□□□ -0.11
USF1-202ENST00000368020 CASS4Q9NQ75 786 aa14.34□□□□□ -0.11
USF1-202ENST00000368020 ARHGEF3Q9NR81 526 aa14.34□□□□□ -0.11
USF1-202ENST00000368020 DCDC2Q9UHG0 476 aa14.34□□□□□ -0.11
USF1-202ENST00000368020 VANGL2Q9ULK5 521 aa14.34□□□□□ -0.11
USF1-202ENST00000368020 AAR2Q9Y312 384 aaKnown RBP14.34□□□□□ -0.11
USF1-202ENST00000368020 MKI67P46013 3256 aaKnown RBP14.34□□□□□ -0.11
USF1-202ENST00000368020 FAM237BA0A1B0GVD1 139 aa14.33□□□□□ -0.12
USF1-202ENST00000368020 KCNK1O00180 336 aa14.33□□□□□ -0.12
USF1-202ENST00000368020 SYN3O14994 580 aa14.33□□□□□ -0.12
USF1-202ENST00000368020 GRIK1P39086 918 aa14.33□□□□□ -0.12
USF1-202ENST00000368020 GP5P40197 560 aa14.33□□□□□ -0.12
USF1-202ENST00000368020 HADHAP40939 763 aa14.33□□□□□ -0.12
USF1-202ENST00000368020 SLC5A3P53794 718 aa14.33□□□□□ -0.12
USF1-202ENST00000368020 DSC1Q08554 894 aa14.33□□□□□ -0.12
USF1-202ENST00000368020 MTA1Q13330 715 aa14.33□□□□□ -0.12
USF1-202ENST00000368020 NOMO2Q5JPE7 1267 aa14.33□□□□□ -0.12
USF1-202ENST00000368020 KCTD11Q693B1 232 aa14.33□□□□□ -0.12
USF1-202ENST00000368020 TIGD7Q6NT04 549 aaPredicted RBP14.33□□□□□ -0.12
USF1-202ENST00000368020 PACS1Q6VY07 963 aa14.33□□□□□ -0.12
USF1-202ENST00000368020 ASRGL1Q7L266 308 aa14.33□□□□□ -0.12
USF1-202ENST00000368020 NLRP9Q7RTR0 991 aa14.33□□□□□ -0.12
USF1-202ENST00000368020 KLHDC8BQ8IXV7 354 aa14.33□□□□□ -0.12
USF1-202ENST00000368020 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.33□□□□□ -0.12
USF1-202ENST00000368020 TBC1D31Q96DN5 1066 aa14.33□□□□□ -0.12
USF1-202ENST00000368020 CERS2Q96G23 380 aa14.33□□□□□ -0.12
USF1-202ENST00000368020 TEKT5Q96M29 485 aa14.33□□□□□ -0.12
USF1-202ENST00000368020 MYLK2Q9H1R3 596 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms