RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 VPS41P49754 854 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 OAZ1P54368 228 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 CDH15P55291 814 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 PRKG2Q13237 762 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 SLC14A1Q13336 389 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 BYSLQ13895 437 aaKnown RBP4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 SLC45A4Q5BKX6 768 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 SH2D4BQ5SQS7 431 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 FAM69AQ5T7M9 428 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 HAUS3Q68CZ6 603 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 GJB7Q6PEY0 223 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 FASTKD5Q7L8L6 764 aaKnown RBP4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 MDGA2Q7Z553 956 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 PRRT2Q7Z6L0 340 aaPredicted RBP4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 ADGRG6Q86SQ4 1221 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 TMEM200AQ86VY9 491 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 BRSK2Q8IWQ3 736 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 TNIP2Q8NFZ5 429 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 C2CD4CQ8TF44 421 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 RUFY2Q8WXA3 655 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 LARP4BQ92615 738 aaKnown RBP4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 CELF1Q92879 486 aaKnown RBP4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 PRRX2Q99811 253 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 NPLQ9BXD5 320 aaPredicted RBP4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 TRIM31Q9BZY9 425 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 TRIM2Q9C040 744 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 USP44Q9H0E7 712 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 PDCL3Q9H2J4 239 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 TXNRD2Q9NNW7 524 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 ZDHHC7Q9NXF8 308 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 TAS2R10Q9NYW0 307 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 SLC17A6Q9P2U8 582 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 DTX4Q9Y2E6 619 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 HEMK1Q9Y5R4 338 aaPredicted RBP4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 NCANO14594 1321 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 KDM3AQ9Y4C1 1321 aa4.09□□□□□ -1.75
RNU6-28P-201ENST00000362378 PI4KAP2A4QPH2 592 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 TMEM191CA6NGB0 347 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 C17orf100A8MU93 164 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 K7ENM7 598 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 MGST3O14880 152 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 SYN3O14994 580 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 ZBED4O75132 1171 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 GCATO75600 419 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 HSP90AA1P07900 732 aaKnown RBP4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 HNRNPCP07910 306 aaKnown RBP eCLIP4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 CYP2D6P10635 497 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 KRT4P19013 534 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 PSMA4P25789 261 aaKnown RBP4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 IDUAP35475 653 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 ARL1P40616 181 aaPredicted RBP4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 MTNR1AP48039 350 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 POLD2P49005 469 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 CLNS1AP54105 237 aaKnown RBP4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 CACNA2D1P54289 1103 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 NAP1L1P55209 391 aaKnown RBP4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 ERV3-1Q14264 604 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 PUM1Q14671 1186 aaKnown RBP eCLIP4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 NAA25Q14CX7 972 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 TSTD2Q5T7W7 516 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 ZNF474Q6S9Z5 364 aaPredicted RBP4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 SLC22A25Q6T423 547 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 ZNF627Q7L945 461 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 DIS3L2Q8IYB7 885 aaKnown RBP4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 VPS52Q8N1B4 723 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 NGEFQ8N5V2 710 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 FAM110DQ8TAY7 271 aaPredicted RBP4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 CAGE1Q8TC20 777 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 C5orf34Q96MH7 638 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 UROC1Q96N76 676 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 EYA3Q99504 573 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 BARD1Q99728 777 aaKnown RBP4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 ABHD14AQ9BUJ0 271 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 NUAK2Q9H093 628 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 LMAN2LQ9H0V9 348 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 TTC12Q9H892 705 aaPredicted RBP4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 VEZTQ9HBM0 779 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 ERVK-5Q9HDB9 667 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 TMEM248Q9NWD8 314 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 HDAC6Q9UBN7 1215 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 SLC25A13Q9UJS0 675 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 ADAM21Q9UKJ8 722 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 PACSIN3Q9UKS6 424 aa4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 LAS1LQ9Y4W2 734 aaKnown RBP4.08□□□□□ -1.76
RNU6-28P-201ENST00000362378 KCNJ18B7U540 433 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 POC1B-GALNT4F8VUJ3 575 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 TNFSF14O43557 240 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 SCGB1D1O95968 90 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 CLEC3BP05452 202 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 URODP06132 367 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 CHRM4P08173 479 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 ADRB1P08588 477 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 CHRM5P08912 532 aaPredicted RBP4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 UBL4AP11441 157 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 GSTM2P28161 218 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 PLA2G5P39877 138 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 SOX2P48431 317 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 TDGQ13569 410 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 PFKFB3Q16875 520 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms