RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 TSPAN1O60635 241 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 COX4I1P13073 169 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 CPA3P15088 417 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 TLR1Q15399 786 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 DPYSL2Q16555 572 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 FSTL4Q6MZW2 842 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 PPP4R1Q8TF05 950 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 SPATA13Q96N96 652 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 NUF2Q9BZD4 464 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 TXNDC16Q9P2K2 825 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 APPL1Q9UKG1 709 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 MDM4O15151 490 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 GLRA3O75311 464 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 HSPA4LO95757 839 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 ZNF280DQ6N043 979 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 KYAT3Q6YP21 454 aaKnown RBP10.83□□□□□ -0.68
SMC3-201ENST00000361804 ARCQ7LC44 396 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 TMEM110Q86TL2 294 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 SNX32Q86XE0 403 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 GALNT4Q8N4A0 578 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 GORASP1Q9BQQ3 440 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 NXF3Q9H4D5 531 aaKnown RBP10.83□□□□□ -0.68
SMC3-201ENST00000361804 UBAP1Q9NZ09 502 aa10.83□□□□□ -0.68
SMC3-201ENST00000361804 P4HA1P13674 534 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 TPSB2P20231 275 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 SULT1E1P49888 294 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 CDK7P50613 346 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 ADIGQ0VDE8 80 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 TPSAB1Q15661 275 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 PGM2L1Q6PCE3 622 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 MARK2Q7KZI7 788 aaKnown RBP10.82□□□□□ -0.68
SMC3-201ENST00000361804 KDELC2Q7Z4H8 507 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 MFN1Q8IWA4 741 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 SGF29Q96ES7 293 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 CATSPER2Q96P56 530 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 OMDQ99983 421 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 CYP3A43Q9HB55 503 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 CHRAC1Q9NRG0 131 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 ADARB2Q9NS39 739 aaKnown RBP10.82□□□□□ -0.68
SMC3-201ENST00000361804 PRMT7Q9NVM4 692 aaPredicted RBP10.82□□□□□ -0.68
SMC3-201ENST00000361804 USP3Q9Y6I4 520 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 XRCC1P18887 633 aaPredicted RBP10.82□□□□□ -0.68
SMC3-201ENST00000361804 DPP6P42658 865 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 THOP1P52888 689 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 KLF10Q13118 480 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 MED21Q13503 144 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 ARTNQ5T4W7 220 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 DNAAF3Q8N9W5 541 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 ZSCAN18Q8TBC5 510 aaPredicted RBP10.82□□□□□ -0.68
SMC3-201ENST00000361804 AFG1LQ8WV93 481 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 PPP2R3CQ969Q6 453 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 OPTNQ96CV9 577 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 KLHL4Q9C0H6 718 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 SUDS3Q9H7L9 328 aaPredicted RBP10.82□□□□□ -0.68
SMC3-201ENST00000361804 MKS1Q9NXB0 559 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 SSX2IPQ9Y2D8 614 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 hCG_2014768A0A024R1R8 64 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 KIF3CO14782 793 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 HOXD8P13378 290 aaPredicted RBP10.82□□□□□ -0.68
SMC3-201ENST00000361804 SERPINB9P50453 376 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 FOLH1Q04609 750 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 PDK3Q15120 406 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 OTUD1Q5VV17 481 aaPredicted RBP10.82□□□□□ -0.68
SMC3-201ENST00000361804 RNF217Q8TC41 542 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 USP33Q8TEY7 942 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 CERS2Q96G23 380 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 PDP2Q9P2J9 529 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 SHROOM3Q8TF72 1996 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 A0A096LPK6 155 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 RBM47A0AV96 593 aaKnown RBP10.82□□□□□ -0.68
SMC3-201ENST00000361804 G3V2L1 256 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 CCNT2O60583 730 aaKnown RBP10.82□□□□□ -0.68
SMC3-201ENST00000361804 LGALS2P05162 132 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 GSTA2P09210 222 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 ENO3P13929 434 aaPredicted RBP10.82□□□□□ -0.68
SMC3-201ENST00000361804 HDCP19113 662 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 MS4A2Q01362 244 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 NXNQ6DKJ4 435 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 IYDQ6PHW0 289 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 LRRC39Q96DD0 335 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 CNBD2Q96M20 576 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 RNF39Q9H2S5 420 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 COPS7BQ9H9Q2 264 aaPredicted RBP10.82□□□□□ -0.68
SMC3-201ENST00000361804 SLC39A10Q9ULF5 831 aa10.82□□□□□ -0.68
SMC3-201ENST00000361804 DPYSL4O14531 572 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 ALDH1A2O94788 518 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 MCF2P10911 925 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 UQCRBP14927 111 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 PDCD2Q16342 344 aaPredicted RBP10.81□□□□□ -0.68
SMC3-201ENST00000361804 PLPPR4Q7Z2D5 763 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 TDRD5Q8NAT2 981 aaKnown RBP10.81□□□□□ -0.68
SMC3-201ENST00000361804 ACTRT2Q8TDY3 377 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 OLFM3Q96PB7 478 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 TRAPPC9Q96Q05 1148 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 NR1H4Q96RI1 486 aaPredicted RBP10.81□□□□□ -0.68
SMC3-201ENST00000361804 CDRT15Q96T59 188 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 EPAS1Q99814 870 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 GATA5Q9BWX5 397 aaPredicted RBP10.81□□□□□ -0.68
SMC3-201ENST00000361804 C1orf21Q9H246 121 aa10.81□□□□□ -0.68
SMC3-201ENST00000361804 SMARCAD1Q9H4L7 1026 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms