RNA–Protein interactions for RNA: ENST00000359902.2

CCDC88B-203, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best) BASIC

Gene CCDC88B, Length 2,326 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-203ENST00000359902 CAPN14A8MX76 684 aa21.3■■□□□ 1
CCDC88B-203ENST00000359902 GYG2O15488 501 aa21.3■■□□□ 1
CCDC88B-203ENST00000359902 ZNF623O75123 536 aa21.3■■□□□ 1
CCDC88B-203ENST00000359902 CYBAP13498 195 aa21.3■■□□□ 1
CCDC88B-203ENST00000359902 TYK2P29597 1187 aa21.3■■□□□ 1
CCDC88B-203ENST00000359902 CD52P31358 61 aa21.3■■□□□ 1
CCDC88B-203ENST00000359902 INSCQ1MX18 579 aa21.3■■□□□ 1
CCDC88B-203ENST00000359902 RPAINQ86UA6 219 aa21.3■■□□□ 1
CCDC88B-203ENST00000359902 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.3■■□□□ 1
CCDC88B-203ENST00000359902 PPP1R14CQ8TAE6 165 aa21.3■■□□□ 1
CCDC88B-203ENST00000359902 ZSCAN18Q8TBC5 510 aaPredicted RBP21.3■■□□□ 1
CCDC88B-203ENST00000359902 DPF3Q92784 378 aa21.3■■□□□ 1
CCDC88B-203ENST00000359902 ZNF669Q96BR6 464 aaPredicted RBP21.3■■□□□ 1
CCDC88B-203ENST00000359902 NUP205Q92621 2012 aa21.3■■□□□ 1
CCDC88B-203ENST00000359902 ITM2AO43736 263 aa21.3■■□□□ 1
CCDC88B-203ENST00000359902 CYP11A1P05108 521 aa21.3■■□□□ 1
CCDC88B-203ENST00000359902 NFKB1P19838 968 aa21.3■■□□□ 1
CCDC88B-203ENST00000359902 KCNA4P22459 653 aa21.3■■□□□ 1
CCDC88B-203ENST00000359902 SERPINB6P35237 376 aa21.3■■□□□ 1
CCDC88B-203ENST00000359902 PCLAFQ15004 111 aa21.3■■□□□ 1
CCDC88B-203ENST00000359902 ANKRD20A4Q4UJ75 823 aa21.3■■□□□ 1
CCDC88B-203ENST00000359902 TEDDM1Q5T9Z0 273 aa21.3■■□□□ 1
CCDC88B-203ENST00000359902 RFWD3Q6PCD5 774 aa21.3■■□□□ 1
CCDC88B-203ENST00000359902 DCLRE1AQ6PJP8 1040 aa21.3■■□□□ 1
CCDC88B-203ENST00000359902 PKMYT1Q99640 499 aa21.3■■□□□ 1
CCDC88B-203ENST00000359902 PPARGC1AQ9UBK2 798 aaKnown RBP21.3■■□□□ 1
CCDC88B-203ENST00000359902 ENTPD5O75356 428 aa21.29■■□□□ 1
CCDC88B-203ENST00000359902 USP1O94782 785 aa21.29■■□□□ 1
CCDC88B-203ENST00000359902 PROCP04070 461 aa21.29■■□□□ 1
CCDC88B-203ENST00000359902 FRG1Q14331 258 aaKnown RBP21.29■■□□□ 1
CCDC88B-203ENST00000359902 CERCAMQ5T4B2 595 aa21.29■■□□□ 1
CCDC88B-203ENST00000359902 C4orf50Q6ZRC1 276 aa21.29■■□□□ 1
CCDC88B-203ENST00000359902 LRRTM3Q86VH5 581 aa21.29■■□□□ 1
CCDC88B-203ENST00000359902 METTL23Q86XA0 190 aa21.29■■□□□ 1
CCDC88B-203ENST00000359902 TREML1Q86YW5 311 aa21.29■■□□□ 1
CCDC88B-203ENST00000359902 TTC8Q8TAM2 541 aa21.29■■□□□ 1
CCDC88B-203ENST00000359902 TEKT5Q96M29 485 aa21.29■■□□□ 1
CCDC88B-203ENST00000359902 NUDCD1Q96RS6 583 aa21.29■■□□□ 1
CCDC88B-203ENST00000359902 VAT1Q99536 393 aa21.29■■□□□ 1
CCDC88B-203ENST00000359902 TMEM216Q9P0N5 145 aa21.29■■□□□ 1
CCDC88B-203ENST00000359902 RPSAP08865 295 aaKnown RBP21.29■■□□□ 1
CCDC88B-203ENST00000359902 CCNG1P51959 295 aa21.29■■□□□ 1
CCDC88B-203ENST00000359902 ITPRIPL1Q6GPH6 555 aa21.29■■□□□ 1
CCDC88B-203ENST00000359902 SCML4Q8N228 414 aa21.29■■□□□ 1
CCDC88B-203ENST00000359902 DQX1Q8TE96 717 aaKnown RBP21.29■■□□□ 1
CCDC88B-203ENST00000359902 SH3TC2Q8TF17 1288 aa21.29■■□□□ 1
CCDC88B-203ENST00000359902 ZNF778Q96MU6 729 aa21.29■■□□□ 1
CCDC88B-203ENST00000359902 TMEM209Q96SK2 561 aa21.29■■□□□ 1
CCDC88B-203ENST00000359902 AGAP2Q99490 1192 aa21.29■■□□□ 1
CCDC88B-203ENST00000359902 RBBP8Q99708 897 aa21.29■■□□□ 1
CCDC88B-203ENST00000359902 UPF3AQ9H1J1 476 aaKnown RBP21.29■■□□□ 1
CCDC88B-203ENST00000359902 ZFYVE28Q9HCC9 887 aa21.29■■□□□ 1
CCDC88B-203ENST00000359902 DMAP1Q9NPF5 467 aaPredicted RBP21.29■■□□□ 1
CCDC88B-203ENST00000359902 COL4A4P53420 1690 aaPredicted RBP21.28■■□□□ 1
CCDC88B-203ENST00000359902 LYPLA1O75608 230 aaPredicted RBP21.28■■□□□ 1
CCDC88B-203ENST00000359902 JCHAINP01591 159 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 GNAZP19086 355 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 GMPRP36959 345 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 THPOP40225 353 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 MAGEA12P43365 314 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 STRA8Q7Z7C7 330 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 DCLK2Q8N568 766 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 ENDOVQ8N8Q3 282 aaKnown RBP21.28■■□□□ 1
CCDC88B-203ENST00000359902 HASPINQ8TF76 798 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 RNF34Q969K3 372 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 ISL2Q96A47 359 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 MFSD3Q96ES6 412 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 CELF6Q96J87 481 aaKnown RBP21.28■■□□□ 1
CCDC88B-203ENST00000359902 APOL2Q9BQE5 337 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 SNX15Q9NRS6 342 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 ADAM28Q9UKQ2 775 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 ARHGAP42A6NI28 874 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 TPBGLP0DKB5 382 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 SLC1A6P48664 564 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 NPY2RP49146 381 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 CMC1Q7Z7K0 106 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 C10orf107Q8IVU9 208 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 OR10T2Q8NGX3 314 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 SCAMP5Q8TAC9 235 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 AZIN2Q96A70 460 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 EBF4Q9BQW3 602 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 OSBPL2Q9H1P3 480 aa21.28■■□□□ 1
CCDC88B-203ENST00000359902 A0A0U1RQF3 1178 aa21.27■■□□□ 1
CCDC88B-203ENST00000359902 MAGEB16A2A368 324 aa21.27■■□□□ 1
CCDC88B-203ENST00000359902 M0QZQ0 153 aa21.27■■□□□ 1
CCDC88B-203ENST00000359902 ATP9BO43861 1147 aa21.27■■□□□ 1
CCDC88B-203ENST00000359902 IGLV3-25P01717 112 aa21.27■■□□□ 1
CCDC88B-203ENST00000359902 SPRP35270 261 aaPredicted RBP21.27■■□□□ 1
CCDC88B-203ENST00000359902 CRHR2Q13324 411 aa21.27■■□□□ 1
CCDC88B-203ENST00000359902 EIF4EBP2Q13542 120 aaPredicted RBP21.27■■□□□ 1
CCDC88B-203ENST00000359902 DSC3Q14574 896 aa21.27■■□□□ 1
CCDC88B-203ENST00000359902 GIMAP7Q8NHV1 300 aa21.27■■□□□ 1
CCDC88B-203ENST00000359902 ZNF358Q9NW07 568 aa21.27■■□□□ 1
CCDC88B-203ENST00000359902 DNAJC16Q9Y2G8 782 aa21.27■■□□□ 1
CCDC88B-203ENST00000359902 SERPINE1P05121 402 aa21.27■□□□□ 0.99
CCDC88B-203ENST00000359902 F7P08709 466 aaPredicted RBP21.27■□□□□ 0.99
CCDC88B-203ENST00000359902 SRGAP2BP0DMP2 458 aa21.27■□□□□ 0.99
CCDC88B-203ENST00000359902 RAB27AP51159 221 aa21.27■□□□□ 0.99
CCDC88B-203ENST00000359902 LIMK2P53671 638 aa21.27■□□□□ 0.99
CCDC88B-203ENST00000359902 HSP90AA5PQ58FG0 334 aa21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms