RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 UGT1A4P22310 534 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 PRKCHP24723 683 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 CDH5P33151 784 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 UGT1A3P35503 534 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 UGT1A5P35504 534 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 ATP4BP51164 291 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 CLDN10P78369 228 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 SP4Q02446 784 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 RNASEH2BQ5TBB1 312 aaKnown RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 CACHD1Q5VU97 1274 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 FAM45BPQ6NSW5 357 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 SLC30A8Q8IWU4 369 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 STK40Q8N2I9 435 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 FAM45AQ8TCE6 357 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 MTG1Q9BT17 334 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 TDRD1Q9BXT4 1180 aaKnown RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 UGT1A7Q9HAW7 530 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 UGT1A10Q9HAW8 530 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 UGT1A8Q9HAW9 530 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 CPNE5Q9HCH3 593 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 DAPK2Q9UIK4 370 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 CNTN6Q9UQ52 1028 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 EIF3LQ9Y262 564 aaKnown RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 C3P01024 1663 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 PDGFRAP16234 1089 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 BGNP21810 368 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 NCCRP1Q6ZVX7 275 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 CRELD1Q96HD1 420 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 INTS10Q9NVR2 710 aaKnown RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 MAGEL2Q9UJ55 1249 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 CHMP2AO43633 222 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 TMCC2O75069 709 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 IL1R1P14778 569 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 POU5F1BQ06416 359 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 TMEM44Q2T9K0 475 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 ZNF544Q6NX49 715 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 SLC44A5Q8NCS7 719 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 COQ7Q99807 217 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 TM9SF3Q9HD45 589 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 TMEM191CA6NGB0 347 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 RAD51BO15315 384 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 BMP2P12643 396 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 MAPK1P28482 360 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 CXCR4P61073 352 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 FAAP100Q0VG06 881 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 ITGADQ13349 1161 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 SUPT20HL1Q3ZLR7 823 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 P3H2Q8IVL5 708 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 COA7Q96BR5 231 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 RPS6KL1Q9Y6S9 549 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 HBP1O60381 514 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 KITP10721 976 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 BFSP2Q13515 415 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 SLC27A3Q5K4L6 730 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 HIPK1Q86Z02 1210 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 ATG4AQ8WYN0 398 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 FBXL18Q96ME1 805 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 ZFYVE28Q9HCC9 887 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 SLC7A8Q9UHI5 535 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 C1orf167Q5SNV9 1468 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 SLC16A4O15374 487 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 RRM1P23921 792 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 USP46P62068 366 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 RAD51Q06609 339 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 ZYG11AQ6WRX3 759 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 FAM83AQ86UY5 434 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 NUAK2Q9H093 628 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 CLEC4MQ9H2X3 399 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 CYP4F11Q9HBI6 524 aa4.19□□□□□ -1.74
SYNE2-204ENST00000358025 MAGED1Q9Y5V3 778 aaPredicted RBP4.19□□□□□ -1.74
SYNE2-204ENST00000358025 H3BNH8 94 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 FANCGO15287 622 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 ABL1P00519 1130 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 SLC1A5Q15758 541 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 TRPV3Q8NET8 790 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 FEM1CQ96JP0 617 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 AGAP3Q96P47 875 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 IMPAD1Q9NX62 359 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 CDKN2BP42772 138 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 LACC1Q8IV20 430 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 RUSC1Q9BVN2 902 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 CAPN14A8MX76 684 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 USP17L15C9J2P7 530 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 USP17L13C9JLJ4 530 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 USP17L11C9JVI0 530 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 USP17L18D6R9N7 530 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 USP17L22D6RA61 530 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 USP17L17D6RBQ6 530 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 USP17L19D6RCP7 530 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 USP17L20D6RJB6 530 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 ATP6V0D1P61421 351 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 USP17L24Q0WX57 530 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 EPC2Q52LR7 807 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.18□□□□□ -1.74
SYNE2-204ENST00000358025 ZNF773Q6PK81 442 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 USP17L6PQ6QN14 398 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 PTTG3PQ9NZH4 202 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 GIT1Q9Y2X7 761 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 RWDD3Q9Y3V2 267 aa4.18□□□□□ -1.74
SYNE2-204ENST00000358025 ZNF197O14709 1029 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms