RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 ACAT2Q9BWD1 397 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 ADARB2Q9NS39 739 aaKnown RBP5.9□□□□□ -1.46
BRCA1-203ENST00000357654 RGS17Q9UGC6 210 aaPredicted RBP5.9□□□□□ -1.46
BRCA1-203ENST00000357654 TMCO1Q9UM00 188 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 GIT1Q9Y2X7 761 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 ZNF536O15090 1300 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 ARHGEF33A8MVX0 844 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 ZNF862O60290 1169 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 UBTFL6P0CB48 400 aaPredicted RBP5.9□□□□□ -1.46
BRCA1-203ENST00000357654 HSPA9P38646 679 aaKnown RBP5.9□□□□□ -1.46
BRCA1-203ENST00000357654 CACNA2D1P54289 1103 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 TBX4P57082 545 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 SP2Q02086 613 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 CBX3Q13185 183 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 PABPC1LQ4VXU2 614 aaKnown RBP5.9□□□□□ -1.46
BRCA1-203ENST00000357654 USP45Q70EL2 814 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 ZZZ3Q8IYH5 903 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 KCT2Q8NC54 265 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 ATG4CQ96DT6 458 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 HEPHQ9BQS7 1158 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 GOLPH3Q9H4A6 298 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 UXTQ9UBK9 157 aaPredicted RBP5.9□□□□□ -1.46
BRCA1-203ENST00000357654 AP4E1Q9UPM8 1137 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 ZNF780BQ9Y6R6 833 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 PP2D1A8MPX8 630 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 MTSS1O43312 755 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 RGS10O43665 173 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 JMJD7P0C870 316 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 TPH1P17752 444 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 STARP49675 285 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 RAB25P57735 213 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 ZNF155Q12901 538 aaPredicted RBP5.9□□□□□ -1.46
BRCA1-203ENST00000357654 MAPK11Q15759 364 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 LPAL2Q16609 132 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 XKR3Q5GH77 459 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 GTF2IRD2BQ6EKJ0 949 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 ILDR2Q71H61 639 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 GTF2IRD2Q86UP8 949 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 GHDCQ8N2G8 530 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 CPA6Q8N4T0 437 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 USP38Q8NB14 1042 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 NEDD1Q8NHV4 660 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 GPR152Q8TDT2 470 aa5.9□□□□□ -1.46
BRCA1-203ENST00000357654 CELF1Q92879 486 aaKnown RBP5.9□□□□□ -1.46
BRCA1-203ENST00000357654 PNO1Q9NRX1 252 aaKnown RBP5.9□□□□□ -1.46
BRCA1-203ENST00000357654 EHBP1L1Q8N3D4 1523 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 ZNF879B4DU55 563 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 ADM5C9JUS6 153 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 AXIN1O15169 862 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 SSNA1O43805 119 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 GAS2O43903 313 aaKnown RBP5.9□□□□□ -1.47
BRCA1-203ENST00000357654 GABBR2O75899 941 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 LINGO3P0C6S8 592 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 CCNYL3P0C7X3 344 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 DBTP11182 482 aaKnown RBP5.9□□□□□ -1.47
BRCA1-203ENST00000357654 CDH3P22223 829 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 IST1P53990 364 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 DRG2P55039 364 aaKnown RBP5.9□□□□□ -1.47
BRCA1-203ENST00000357654 PLGLAQ15195 96 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 TTC7BQ86TV6 843 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 SYT12Q8IV01 421 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 DENND1CQ8IV53 801 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 ZNF366Q8N895 744 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 EAF2Q96CJ1 260 aaPredicted RBP5.9□□□□□ -1.47
BRCA1-203ENST00000357654 REPS1Q96D71 796 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 QKIQ96PU8 341 aaKnown RBP eCLIP5.9□□□□□ -1.47
BRCA1-203ENST00000357654 TCF25Q9BQ70 676 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 WWP1Q9H0M0 922 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 TRABDQ9H4I3 376 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 ENY2Q9NPA8 101 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 RPTORQ8N122 1335 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 NT5C1B-RDH14C9J2C7 533 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 ZBTB14O43829 449 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 LCA5LO95447 670 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 TMEM11P17152 192 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 FXR2P51116 673 aaKnown RBP eCLIP5.9□□□□□ -1.47
BRCA1-203ENST00000357654 C2CD6Q53TS8 623 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 BHLHB9Q6PI77 547 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 IZUMO2Q6UXV1 221 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 ZNF527Q8NB42 609 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 ZSWIM2Q8NEG5 633 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 CCDC115Q96NT0 180 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 AGPAT1Q99943 283 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 ACE2Q9BYF1 805 aaPredicted RBP5.9□□□□□ -1.47
BRCA1-203ENST00000357654 DDX47Q9H0S4 455 aaKnown RBP5.9□□□□□ -1.47
BRCA1-203ENST00000357654 ETNK1Q9HBU6 452 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 PCDH12Q9NPG4 1184 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 ATAD3AQ9NVI7 634 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 ARHGAP28Q9P2N2 729 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 DAPK2Q9UIK4 370 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 FBXW2Q9UKT8 454 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 SNX13Q9Y5W8 968 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 MROH7-TTC4A0A0A0MT08 1334 aa5.9□□□□□ -1.47
BRCA1-203ENST00000357654 MFAP3LO75121 409 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 VIPP01282 170 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 NTRK1P04629 796 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 CYP2C8P10632 490 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 DRD4P21917 467 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 CCNE1P24864 410 aa5.89□□□□□ -1.47
BRCA1-203ENST00000357654 TNFRSF8P28908 595 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms