RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 KCNA1Q09470 495 aa3.9□□□□□ -1.78
SMC1B-201ENST00000357450 C3orf38Q5JPI3 329 aa3.9□□□□□ -1.78
SMC1B-201ENST00000357450 EFHC2Q5JST6 749 aa3.9□□□□□ -1.78
SMC1B-201ENST00000357450 ESRP1Q6NXG1 681 aaKnown RBP3.9□□□□□ -1.78
SMC1B-201ENST00000357450 LAYNQ6UX15 382 aa3.9□□□□□ -1.78
SMC1B-201ENST00000357450 UNC13DQ70J99 1090 aa3.9□□□□□ -1.78
SMC1B-201ENST00000357450 TCEAL8Q8IYN2 117 aa3.9□□□□□ -1.78
SMC1B-201ENST00000357450 CCDC112Q8NEF3 446 aa3.9□□□□□ -1.78
SMC1B-201ENST00000357450 FAM46DQ8NEK8 389 aa3.9□□□□□ -1.78
SMC1B-201ENST00000357450 OR5B17Q8NGF7 314 aa3.9□□□□□ -1.78
SMC1B-201ENST00000357450 SNIP1Q8TAD8 396 aaKnown RBP3.9□□□□□ -1.78
SMC1B-201ENST00000357450 SH3KBP1Q96B97 665 aa3.9□□□□□ -1.78
SMC1B-201ENST00000357450 PCED1BQ96HM7 432 aa3.9□□□□□ -1.78
SMC1B-201ENST00000357450 C11orf70Q9BRQ4 267 aa3.9□□□□□ -1.78
SMC1B-201ENST00000357450 OXCT2Q9BYC2 517 aaPredicted RBP3.9□□□□□ -1.78
SMC1B-201ENST00000357450 FZD8Q9H461 694 aa3.9□□□□□ -1.78
SMC1B-201ENST00000357450 CUEDC2Q9H467 287 aa3.9□□□□□ -1.78
SMC1B-201ENST00000357450 TSPY26PQ9H489 355 aa3.9□□□□□ -1.78
SMC1B-201ENST00000357450 DHX35Q9H5Z1 703 aaKnown RBP3.9□□□□□ -1.78
SMC1B-201ENST00000357450 SOHLH2Q9NX45 425 aa3.9□□□□□ -1.78
SMC1B-201ENST00000357450 TAB2Q9NYJ8 693 aa3.9□□□□□ -1.78
SMC1B-201ENST00000357450 DONSONQ9NYP3 566 aa3.9□□□□□ -1.78
SMC1B-201ENST00000357450 CTTNBP2NLQ9P2B4 639 aa3.9□□□□□ -1.78
SMC1B-201ENST00000357450 RALYQ9UKM9 306 aaKnown RBP3.9□□□□□ -1.78
SMC1B-201ENST00000357450 PCDHGA2Q9Y5H1 932 aa3.9□□□□□ -1.78
SMC1B-201ENST00000357450 PLXNA2O75051 1894 aa3.9□□□□□ -1.78
SMC1B-201ENST00000357450 A0A1W2PP55 124 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 A6NCN8 305 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 ST8SIA5O15466 376 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 SH3BP5O60239 455 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 PRAMEF12O95522 483 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 TBXAS1P24557 533 aaPredicted RBP3.9□□□□□ -1.79
SMC1B-201ENST00000357450 LMO2P25791 158 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 DDX6P26196 483 aaKnown RBP eCLIP3.9□□□□□ -1.79
SMC1B-201ENST00000357450 EPHB2P29323 1055 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 CASP14P31944 242 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 MGAT5Q09328 741 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 GTF2H3Q13889 308 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 SPA17Q15506 151 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 EDRF1Q3B7T1 1238 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 MPPE1Q53F39 396 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 ZC3H12AQ5D1E8 599 aaKnown RBP3.9□□□□□ -1.79
SMC1B-201ENST00000357450 NUGGCQ68CJ6 796 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 ZNF720Q7Z2F6 126 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 KIAA1328Q86T90 577 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 OOSP2Q86WS3 158 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 BBS7Q8IWZ6 715 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 IQCKQ8N0W5 287 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 BCL7CQ8WUZ0 217 aaPredicted RBP3.9□□□□□ -1.79
SMC1B-201ENST00000357450 EVPLQ92817 2033 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 HPS1Q92902 700 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 MRPL45Q9BRJ2 306 aaKnown RBP3.9□□□□□ -1.79
SMC1B-201ENST00000357450 C2orf49Q9BVC5 232 aaPredicted RBP3.9□□□□□ -1.79
SMC1B-201ENST00000357450 SLC46A2Q9BY10 475 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 FAM126AQ9BYI3 521 aaPredicted RBP3.9□□□□□ -1.79
SMC1B-201ENST00000357450 EDEM3Q9BZQ6 932 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 IKZF4Q9H2S9 585 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 TM7SF3Q9NS93 570 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 SAMSN1Q9NSI8 373 aaKnown RBP3.9□□□□□ -1.79
SMC1B-201ENST00000357450 CALCOCO1Q9P1Z2 691 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 VAV3Q9UKW4 847 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 DNAJC16Q9Y2G8 782 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 C2CD2Q9Y426 696 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 MAP4K5Q9Y4K4 846 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 SRPRBQ9Y5M8 271 aaKnown RBP3.9□□□□□ -1.79
SMC1B-201ENST00000357450 BACE2Q9Y5Z0 518 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 KRBA1A5PL33 1030 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 SMTNL1A8MU46 457 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 EIF3DO15371 548 aaKnown RBP eCLIP3.9□□□□□ -1.79
SMC1B-201ENST00000357450 SEC31AO94979 1220 aaKnown RBP3.9□□□□□ -1.79
SMC1B-201ENST00000357450 LDOC1O95751 146 aaPredicted RBP3.9□□□□□ -1.79
SMC1B-201ENST00000357450 GSRP00390 522 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 GARTP22102 1010 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 TNFRSF8P28908 595 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 PBLDP30039 288 aaPredicted RBP3.9□□□□□ -1.79
SMC1B-201ENST00000357450 SLC8A1P32418 973 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 MAGEA9P43362 315 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 OXCT1P55809 520 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 CXADRP78310 365 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 SPIDRQ14159 915 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 MYBPC2Q14324 1141 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 TRIP6Q15654 476 aaKnown RBP3.9□□□□□ -1.79
SMC1B-201ENST00000357450 UPP1Q16831 310 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 DNTTIP2Q5QJE6 756 aaKnown RBP3.9□□□□□ -1.79
SMC1B-201ENST00000357450 SPATA1Q5VX52 437 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 ZNF776Q68DI1 518 aaPredicted RBP3.9□□□□□ -1.79
SMC1B-201ENST00000357450 ERAP2Q6P179 960 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 FOXR2Q6PJQ5 311 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 FMNL3Q8IVF7 1028 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 CCDC105Q8IYK2 499 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 RBBP8NLQ8NC74 664 aaPredicted RBP3.9□□□□□ -1.79
SMC1B-201ENST00000357450 MAPK15Q8TD08 544 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 ZSWIM3Q96MP5 696 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 ASB16Q96NS5 453 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 CNTNAP3BQ96NU0 1288 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 SRPK1Q96SB4 655 aaKnown RBP3.9□□□□□ -1.79
SMC1B-201ENST00000357450 CHP1Q99653 195 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 ACBD6Q9BR61 282 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 SCNM1Q9BWG6 230 aa3.9□□□□□ -1.79
SMC1B-201ENST00000357450 CNTNAP3Q9BZ76 1288 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms