RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 MYOZ2Q9NPC6 264 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 GINS2Q9Y248 185 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 PCDHB12Q9Y5F1 795 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 PTPRFP10586 1907 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 C7orf72A4D263 438 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 G3V2L1 256 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 GCATO75600 419 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 APBA3O96018 575 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 HNRNPCP07910 306 aaKnown RBP eCLIP10.36□□□□□ -0.75
PTPRA-203ENST00000356147 FAM58BPP0C7Q3 252 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 VDRP11473 427 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 HARS2P49590 506 aaKnown RBP10.36□□□□□ -0.75
PTPRA-203ENST00000356147 ADARP55265 1226 aaKnown RBP10.36□□□□□ -0.75
PTPRA-203ENST00000356147 PRAMEP78395 509 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 SOWAHAQ2M3V2 549 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 FSCBQ5H9T9 825 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 NCBP2-AS2Q69YL0 99 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 XRRA1Q6P2D8 792 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 TRIM67Q6ZTA4 783 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 PID1Q7Z2X4 250 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 CCNYL1Q8N7R7 359 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 DNAAF3Q8N9W5 541 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 EME1Q96AY2 570 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 CERS2Q96G23 380 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 P2RY11Q96G91 374 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 WRNIP1Q96S55 665 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 RTKNQ9BST9 563 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 TEX13BQ9BXU2 312 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 FRMD8Q9BZ67 464 aaPredicted RBP10.36□□□□□ -0.75
PTPRA-203ENST00000356147 RBM38Q9H0Z9 239 aaKnown RBP10.36□□□□□ -0.75
PTPRA-203ENST00000356147 CHCHD3Q9NX63 227 aaKnown RBP10.36□□□□□ -0.75
PTPRA-203ENST00000356147 GGA3Q9NZ52 723 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 HESX1Q9UBX0 185 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 ZDHHC2Q9UIJ5 367 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 SLC39A10Q9ULF5 831 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 COL2A1P02458 1487 aaPredicted RBP10.36□□□□□ -0.75
PTPRA-203ENST00000356147 COL4A5P29400 1685 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 PLOD2O00469 737 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 B4GALT4O60513 344 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 ARIH2O95376 493 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 C2P06681 752 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 TFPTP0C1Z6 253 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 SOX11P35716 441 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 ETFBP38117 255 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 EFNA5P52803 228 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 CDK18Q07002 472 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 ART3Q13508 389 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 SEMA5AQ13591 1074 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 ZNF423Q2M1K9 1284 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 ARL13AQ5H913 290 aaPredicted RBP10.36□□□□□ -0.75
PTPRA-203ENST00000356147 ILDR2Q71H61 639 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 TRIML2Q8N7C3 387 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 KBTBD7Q8WVZ9 684 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 SCYL1Q96KG9 808 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 CCT7Q99832 543 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 DCUN1D5Q9BTE7 237 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 PDGFDQ9GZP0 370 aaPredicted RBP10.36□□□□□ -0.75
PTPRA-203ENST00000356147 DPEP3Q9H4B8 488 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 TASP1Q9H6P5 420 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 WDR41Q9HAD4 459 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 NME7Q9Y5B8 376 aa10.36□□□□□ -0.75
PTPRA-203ENST00000356147 TNFAIP8O95379 198 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 CCDC130P13994 396 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 TPSB2P20231 275 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 ABCD1P33897 745 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 PPIDQ08752 370 aaKnown RBP10.35□□□□□ -0.75
PTPRA-203ENST00000356147 CYLC2Q14093 348 aaPredicted RBP10.35□□□□□ -0.75
PTPRA-203ENST00000356147 TPSAB1Q15661 275 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 PITRM1Q5JRX3 1037 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 GLRA4Q5JXX5 417 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 CERCAMQ5T4B2 595 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 DLK2Q6UY11 383 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 GK5Q6ZS86 529 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 GAB3Q8WWW8 586 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 LRTOMTQ8WZ04 291 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 FAM149B1Q96BN6 582 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 FERMT1Q9BQL6 677 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 Q9H521 79 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 COQ10BQ9H8M1 238 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 C6orf203Q9P0P8 240 aaPredicted RBP10.35□□□□□ -0.75
PTPRA-203ENST00000356147 ZNF711Q9Y462 761 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 CDY2AQ9Y6F7 541 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 CDY1Q9Y6F8 540 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 CROCCQ5TZA2 2017 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 RGPD3A6NKT7 1758 aaPredicted RBP10.35□□□□□ -0.75
PTPRA-203ENST00000356147 RGPD4Q7Z3J3 1758 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 A0A0A0MRY4 1105 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 DENRO43583 198 aaKnown RBP10.35□□□□□ -0.75
PTPRA-203ENST00000356147 TRMUO75648 421 aaKnown RBP10.35□□□□□ -0.75
PTPRA-203ENST00000356147 EPHX2P34913 555 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 GP5P40197 560 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 MAGEA6P43360 314 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 GRIA4P48058 902 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 SLC6A3Q01959 620 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 SULF1Q8IWU6 871 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 DIS3LQ8TF46 1054 aaKnown RBP10.35□□□□□ -0.75
PTPRA-203ENST00000356147 SPATA13Q96N96 652 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 ZNF670Q9BS34 389 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 RNF11Q9Y3C5 154 aa10.35□□□□□ -0.75
PTPRA-203ENST00000356147 KCNU1A8MYU2 1149 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms