RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 TUSC3Q13454 348 aa7.32□□□□□ -1.24
VPS13A-201ENST00000355766 SGSM1Q2NKQ1 1148 aa7.32□□□□□ -1.24
VPS13A-201ENST00000355766 DGKKQ5KSL6 1271 aa7.32□□□□□ -1.24
VPS13A-201ENST00000355766 CCDC122Q5T0U0 273 aa7.32□□□□□ -1.24
VPS13A-201ENST00000355766 FAM171A1Q5VUB5 890 aa7.32□□□□□ -1.24
VPS13A-201ENST00000355766 TDRD10Q5VZ19 366 aaKnown RBP7.32□□□□□ -1.24
VPS13A-201ENST00000355766 TCEAL6Q6IPX3 200 aa7.32□□□□□ -1.24
VPS13A-201ENST00000355766 SLC27A1Q6PCB7 646 aa7.32□□□□□ -1.24
VPS13A-201ENST00000355766 KBTBD6Q86V97 674 aa7.32□□□□□ -1.24
VPS13A-201ENST00000355766 ACRBPQ8NEB7 543 aa7.32□□□□□ -1.24
VPS13A-201ENST00000355766 MYRIPQ8NFW9 859 aa7.32□□□□□ -1.24
VPS13A-201ENST00000355766 SLC30A5Q8TAD4 765 aa7.32□□□□□ -1.24
VPS13A-201ENST00000355766 TAS1R2Q8TE23 839 aa7.32□□□□□ -1.24
VPS13A-201ENST00000355766 TCEAL3Q969E4 200 aa7.32□□□□□ -1.24
VPS13A-201ENST00000355766 ANKRD36BP1Q96IX9 119 aa7.32□□□□□ -1.24
VPS13A-201ENST00000355766 CPB2Q96IY4 423 aa7.32□□□□□ -1.24
VPS13A-201ENST00000355766 NOX5Q96PH1 765 aa7.32□□□□□ -1.24
VPS13A-201ENST00000355766 CCDC94Q9BW85 323 aaPredicted RBP7.32□□□□□ -1.24
VPS13A-201ENST00000355766 HAPLN2Q9GZV7 340 aa7.32□□□□□ -1.24
VPS13A-201ENST00000355766 RNF32Q9H0A6 362 aa7.32□□□□□ -1.24
VPS13A-201ENST00000355766 RPF1Q9H9Y2 349 aaKnown RBP7.32□□□□□ -1.24
VPS13A-201ENST00000355766 MTRRQ9UBK8 725 aa7.32□□□□□ -1.24
VPS13A-201ENST00000355766 ITGA11Q9UKX5 1188 aa7.32□□□□□ -1.24
VPS13A-201ENST00000355766 GREB1Q4ZG55 1949 aa7.32□□□□□ -1.24
VPS13A-201ENST00000355766 AKAP13Q12802 2813 aa7.32□□□□□ -1.24
VPS13A-201ENST00000355766 NBEAQ8NFP9 2946 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 DSPP15924 2871 aaKnown RBP7.31□□□□□ -1.24
VPS13A-201ENST00000355766 MTCL1Q9Y4B5 1905 aaKnown RBP7.31□□□□□ -1.24
VPS13A-201ENST00000355766 CCDC163A0A0D9SF12 145 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 ARHGEF37A1IGU5 675 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 WDR27A2RRH5 827 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 CASTOR2A6NHX0 329 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 LOC400499M0QZD8 3231 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 ETV2O00321 342 aaPredicted RBP7.31□□□□□ -1.24
VPS13A-201ENST00000355766 ZNF263O14978 683 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 XPOTO43592 962 aaKnown RBP7.31□□□□□ -1.24
VPS13A-201ENST00000355766 TACC1O75410 805 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 LSM8O95777 96 aaKnown RBP7.31□□□□□ -1.24
VPS13A-201ENST00000355766 BPNT1O95861 308 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 HLA-DRAP01903 254 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 LRG1P02750 347 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 PF4P02776 101 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 EDN1P05305 212 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 TMEM191BP0C7N4 346 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 MYBL1P10243 752 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 CSRP1P21291 193 aaKnown RBP7.31□□□□□ -1.24
VPS13A-201ENST00000355766 AKAP5P24588 427 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 HOXC13P31276 330 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 CASQ1P31415 396 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 OR1D2P34982 312 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 ACOT2P49753 483 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 NOP14P78316 857 aaKnown RBP7.31□□□□□ -1.24
VPS13A-201ENST00000355766 CDR2Q01850 454 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 BIRC3Q13489 604 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 CUL2Q13617 745 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 WHAMMP3Q1A5X7 153 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 SOWAHCQ53LP3 525 aaPredicted RBP7.31□□□□□ -1.24
VPS13A-201ENST00000355766 DAB2IPQ5VWQ8 1189 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 ALKBH5Q6P6C2 394 aaKnown RBP7.31□□□□□ -1.24
VPS13A-201ENST00000355766 ATG14Q6ZNE5 492 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 ZNF571Q7Z3V5 609 aaPredicted RBP7.31□□□□□ -1.24
VPS13A-201ENST00000355766 PPM1KQ8N3J5 372 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 PDZD8Q8NEN9 1154 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 RNF141Q8WVD5 230 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 GATAD2BQ8WXI9 593 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 SMARCD2Q92925 531 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 TCEAL4Q96EI5 215 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 NAPGQ99747 312 aaPredicted RBP7.31□□□□□ -1.24
VPS13A-201ENST00000355766 TRIM6Q9C030 488 aaPredicted RBP7.31□□□□□ -1.24
VPS13A-201ENST00000355766 DNAI2Q9GZS0 605 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 C8orf33Q9H7E9 229 aaPredicted RBP7.31□□□□□ -1.24
VPS13A-201ENST00000355766 CYP3A43Q9HB55 503 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 TRPV4Q9HBA0 871 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 PDE11AQ9HCR9 933 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 UBE2TQ9NPD8 197 aaPredicted RBP7.31□□□□□ -1.24
VPS13A-201ENST00000355766 RNF14Q9UBS8 474 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 NOCTQ9UK39 431 aaKnown RBP7.31□□□□□ -1.24
VPS13A-201ENST00000355766 JRKLQ9Y4A0 524 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 NEUROG3Q9Y4Z2 214 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 CDY1Q9Y6F8 540 aa7.31□□□□□ -1.24
VPS13A-201ENST00000355766 FLNBO75369 2602 aaKnown RBP7.3□□□□□ -1.24
VPS13A-201ENST00000355766 A0A087X0T9 212 aa7.3□□□□□ -1.24
VPS13A-201ENST00000355766 LNP1A1A4G5 178 aa7.3□□□□□ -1.24
VPS13A-201ENST00000355766 MYBPHLA2RUH7 354 aa7.3□□□□□ -1.24
VPS13A-201ENST00000355766 ANKRD62A6NC57 917 aa7.3□□□□□ -1.24
VPS13A-201ENST00000355766 SLC38A8A6NNN8 435 aa7.3□□□□□ -1.24
VPS13A-201ENST00000355766 C4orf47A7E2U8 309 aa7.3□□□□□ -1.24
VPS13A-201ENST00000355766 CES2O00748 559 aa7.3□□□□□ -1.24
VPS13A-201ENST00000355766 ZNF197O14709 1029 aa7.3□□□□□ -1.24
VPS13A-201ENST00000355766 B4GALT5O43286 388 aa7.3□□□□□ -1.24
VPS13A-201ENST00000355766 CTIFO43310 598 aaKnown RBP7.3□□□□□ -1.24
VPS13A-201ENST00000355766 MTA2O94776 668 aa7.3□□□□□ -1.24
VPS13A-201ENST00000355766 VNN1O95497 513 aa7.3□□□□□ -1.24
VPS13A-201ENST00000355766 PLEKP08567 350 aaPredicted RBP7.3□□□□□ -1.24
VPS13A-201ENST00000355766 H2AFZP0C0S5 128 aa7.3□□□□□ -1.24
VPS13A-201ENST00000355766 FAM163BP0C2L3 166 aa7.3□□□□□ -1.24
VPS13A-201ENST00000355766 FAM228BP0C875 321 aa7.3□□□□□ -1.24
VPS13A-201ENST00000355766 MED14OSP0DP75 135 aa7.3□□□□□ -1.24
VPS13A-201ENST00000355766 CEACAM1P13688 526 aa7.3□□□□□ -1.24
VPS13A-201ENST00000355766 KCNE1P15382 129 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms