RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 HCFC1R1Q9NWW0 138 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 DONSONQ9NYP3 566 aa21.06■□□□□ 0.96
TRIM4-202ENST00000354241 E7EVH7 732 aa21.05■□□□□ 0.96
TRIM4-202ENST00000354241 H0YGN5 161 aa21.05■□□□□ 0.96
TRIM4-202ENST00000354241 PER2O15055 1255 aa21.05■□□□□ 0.96
TRIM4-202ENST00000354241 ACSL3O95573 720 aa21.05■□□□□ 0.96
TRIM4-202ENST00000354241 SYF2O95926 243 aaKnown RBP21.05■□□□□ 0.96
TRIM4-202ENST00000354241 OAS2P29728 719 aaKnown RBP21.05■□□□□ 0.96
TRIM4-202ENST00000354241 FDFT1P37268 417 aa21.05■□□□□ 0.96
TRIM4-202ENST00000354241 MAGEA4P43358 317 aa21.05■□□□□ 0.96
TRIM4-202ENST00000354241 PDIA2Q13087 525 aaKnown RBP21.05■□□□□ 0.96
TRIM4-202ENST00000354241 HP1BP3Q5SSJ5 553 aaPredicted RBP21.05■□□□□ 0.96
TRIM4-202ENST00000354241 FNBP1LQ5T0N5 605 aa21.05■□□□□ 0.96
TRIM4-202ENST00000354241 AFMIDQ63HM1 303 aa21.05■□□□□ 0.96
TRIM4-202ENST00000354241 PDE12Q6L8Q7 609 aaKnown RBP21.05■□□□□ 0.96
TRIM4-202ENST00000354241 CFAP52Q8N1V2 620 aa21.05■□□□□ 0.96
TRIM4-202ENST00000354241 GOLGA6L1Q8N7Z2 621 aa21.05■□□□□ 0.96
TRIM4-202ENST00000354241 AZIN2Q96A70 460 aa21.05■□□□□ 0.96
TRIM4-202ENST00000354241 ZFRQ96KR1 1074 aaKnown RBP21.05■□□□□ 0.96
TRIM4-202ENST00000354241 C9orf72Q96LT7 481 aa21.05■□□□□ 0.96
TRIM4-202ENST00000354241 NINJ2Q9NZG7 142 aa21.05■□□□□ 0.96
TRIM4-202ENST00000354241 CPQQ9Y646 472 aa21.05■□□□□ 0.96
TRIM4-202ENST00000354241 NFS1Q9Y697 457 aa21.05■□□□□ 0.96
TRIM4-202ENST00000354241 DOCK6Q96HP0 2047 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 OPA1O60313 960 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 OLFM2O95897 454 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 CCNCP24863 283 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 PAPOLAP51003 745 aaKnown RBP21.04■□□□□ 0.96
TRIM4-202ENST00000354241 IFFO1Q0D2I5 559 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 ZBTB17Q13105 803 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 KYNUQ16719 465 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 CEP85LQ5SZL2 805 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 RBM23Q86U06 439 aaKnown RBP21.04■□□□□ 0.96
TRIM4-202ENST00000354241 UMODL1-AS1Q8N2C9 162 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 TTC16Q8NEE8 873 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 EXOC4Q96A65 974 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 PBX4Q9BYU1 374 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 NKX2-4Q9H2Z4 354 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 NOL6Q9H6R4 1146 aaKnown RBP21.04■□□□□ 0.96
TRIM4-202ENST00000354241 MED4Q9NPJ6 270 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 AGO1Q9UL18 857 aaKnown RBP21.04■□□□□ 0.96
TRIM4-202ENST00000354241 TRDMT1O14717 391 aaKnown RBP21.04■□□□□ 0.96
TRIM4-202ENST00000354241 BANF1O75531 89 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 CKMP06732 381 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 PSMB4P28070 264 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 LMAN1P49257 510 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 NDST2P52849 883 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 ZNF33AQ06730 810 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 MTM1Q13496 603 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 SEMA5AQ13591 1074 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 PPP1R21Q6ZMI0 780 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 RELL1Q8IUW5 271 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 TSGA13Q96PP4 275 aa21.04■□□□□ 0.96
TRIM4-202ENST00000354241 ATG2AQ2TAZ0 1938 aa21.03■□□□□ 0.96
TRIM4-202ENST00000354241 NRG2O14511 850 aaPredicted RBP21.03■□□□□ 0.96
TRIM4-202ENST00000354241 MAFKO60675 156 aa21.03■□□□□ 0.96
TRIM4-202ENST00000354241 TTC4O95801 387 aa21.03■□□□□ 0.96
TRIM4-202ENST00000354241 SHBGP04278 402 aa21.03■□□□□ 0.96
TRIM4-202ENST00000354241 MAGEA6P43360 314 aa21.03■□□□□ 0.96
TRIM4-202ENST00000354241 FASTKD3Q14CZ7 662 aaKnown RBP21.03■□□□□ 0.96
TRIM4-202ENST00000354241 PARP6Q2NL67 630 aa21.03■□□□□ 0.96
TRIM4-202ENST00000354241 RABGAP1LQ5R372 815 aa21.03■□□□□ 0.96
TRIM4-202ENST00000354241 STXBP5Q5T5C0 1151 aa21.03■□□□□ 0.96
TRIM4-202ENST00000354241 RTL10Q7L3V2 364 aa21.03■□□□□ 0.96
TRIM4-202ENST00000354241 ZBED8Q8IZ13 594 aa21.03■□□□□ 0.96
TRIM4-202ENST00000354241 PDIK1LQ8N165 341 aa21.03■□□□□ 0.96
TRIM4-202ENST00000354241 USP33Q8TEY7 942 aa21.03■□□□□ 0.96
TRIM4-202ENST00000354241 AGAP3Q96P47 875 aa21.03■□□□□ 0.96
TRIM4-202ENST00000354241 ZFP37Q9Y6Q3 630 aaPredicted RBP21.03■□□□□ 0.96
TRIM4-202ENST00000354241 TRAV19A0A0A6YYK7 116 aa21.02■□□□□ 0.96
TRIM4-202ENST00000354241 SCAMP3O14828 347 aaKnown RBP21.02■□□□□ 0.96
TRIM4-202ENST00000354241 JCHAINP01591 159 aa21.02■□□□□ 0.96
TRIM4-202ENST00000354241 NUDT17P0C025 328 aa21.02■□□□□ 0.96
TRIM4-202ENST00000354241 TPSB2P20231 275 aa21.02■□□□□ 0.96
TRIM4-202ENST00000354241 OR1E1P30953 314 aa21.02■□□□□ 0.96
TRIM4-202ENST00000354241 ZNF844Q08AG5 666 aa21.02■□□□□ 0.96
TRIM4-202ENST00000354241 TPSAB1Q15661 275 aa21.02■□□□□ 0.96
TRIM4-202ENST00000354241 GLIPR1L2Q4G1C9 344 aa21.02■□□□□ 0.96
TRIM4-202ENST00000354241 MSS51Q4VC12 460 aa21.02■□□□□ 0.96
TRIM4-202ENST00000354241 TEX44Q53QW1 395 aa21.02■□□□□ 0.96
TRIM4-202ENST00000354241 ZNF354CQ86Y25 554 aa21.02■□□□□ 0.96
TRIM4-202ENST00000354241 ANKMY2Q8IV38 441 aa21.02■□□□□ 0.96
TRIM4-202ENST00000354241 ARNTL2Q8WYA1 636 aa21.02■□□□□ 0.96
TRIM4-202ENST00000354241 HMCESQ96FZ2 354 aa21.02■□□□□ 0.96
TRIM4-202ENST00000354241 SH3GL2Q99962 352 aa21.02■□□□□ 0.96
TRIM4-202ENST00000354241 DDX50Q9BQ39 737 aaKnown RBP21.02■□□□□ 0.96
TRIM4-202ENST00000354241 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.02■□□□□ 0.95
TRIM4-202ENST00000354241 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.02■□□□□ 0.95
TRIM4-202ENST00000354241 ARHGAP42A6NI28 874 aa21.02■□□□□ 0.95
TRIM4-202ENST00000354241 RASA4BC9J798 803 aa21.02■□□□□ 0.95
TRIM4-202ENST00000354241 ZBTB24O43167 697 aaPredicted RBP21.02■□□□□ 0.95
TRIM4-202ENST00000354241 RASA4O43374 803 aa21.02■□□□□ 0.95
TRIM4-202ENST00000354241 TSPAN3O60637 253 aa21.02■□□□□ 0.95
TRIM4-202ENST00000354241 C1RP00736 705 aa21.02■□□□□ 0.95
TRIM4-202ENST00000354241 PTPN2P17706 415 aa21.02■□□□□ 0.95
TRIM4-202ENST00000354241 CCR2P41597 374 aa21.02■□□□□ 0.95
TRIM4-202ENST00000354241 MAPKAPK2P49137 400 aa21.02■□□□□ 0.95
TRIM4-202ENST00000354241 EIF3BP55884 814 aaKnown RBP21.02■□□□□ 0.95
TRIM4-202ENST00000354241 BBS9Q3SYG4 887 aa21.02■□□□□ 0.95
TRIM4-202ENST00000354241 C5orf22Q49AR2 442 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms