RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 KCNA2P16389 499 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 CR2P20023 1033 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 TYK2P29597 1187 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 CTNNA1P35221 906 aaKnown RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 MSX2P35548 267 aaPredicted RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 PRKCIP41743 596 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 RABGGTBP53611 331 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 POLE2P56282 527 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 YBEYP58557 167 aaPredicted RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 BPIFB3P59826 476 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 EFNB1P98172 346 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 FRG1Q14331 258 aaKnown RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 GRM7Q14831 915 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 RUNDC3AQ59EK9 446 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 KRBOX4Q5JUW0 171 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 SLC2A7Q6PXP3 512 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 TAX1BP1Q86VP1 789 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 MAPKAPK5Q8IW41 473 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 SUGP2Q8IX01 1082 aaKnown RBP eCLIP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 ADGRF3Q8IZF5 1079 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 SYNE4Q8N205 404 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 AOPEPQ8N6M6 819 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 IL17RCQ8NAC3 791 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 RFWD2Q8NHY2 731 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 MYCBPAPQ8TBZ2 947 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 ST8SIA2Q92186 375 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 FAM168AQ92567 244 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 SLC22A18Q96BI1 424 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 CTHRC1Q96CG8 243 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 CCDC120Q96HB5 630 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 FNBP1Q96RU3 617 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 MACROD1Q9BQ69 325 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 RETREG1Q9H6L5 497 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 FBXO28Q9NVF7 368 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 NTMQ9P121 344 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 ZNF70Q9UC06 446 aaPredicted RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 LIMA1Q9UHB6 759 aaKnown RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 B3GNT3Q9Y2A9 372 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 DUSP10Q9Y6W6 482 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 AHDC1Q5TGY3 1603 aaPredicted RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 TEX13CA0A0J9YWL9 993 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 FRMD3A2A2Y4 597 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 TARSL2A2RTX5 802 aaKnown RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 AHRRA9YTQ3 701 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 HNRNPCL1O60812 293 aaKnown RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 TADA2AO75478 443 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 LARGE1O95461 756 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 IL6RP08887 468 aaPredicted RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 IL7RP16871 459 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 ZFP36P26651 326 aaKnown RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 PRKAR1BP31321 381 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 GRK5P34947 590 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 NNMTP40261 264 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 AGTR2P50052 363 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 TIRAPP58753 221 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 RAC3P60763 192 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 E2F1Q01094 437 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 NEXNQ0ZGT2 675 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 FZD5Q13467 585 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 THOC5Q13769 683 aaKnown RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 ZMAT1Q5H9K5 638 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 TREML2Q5T2D2 321 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 ZNF449Q6P9G9 518 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 DCLRE1AQ6PJP8 1040 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 KYAT3Q6YP21 454 aaKnown RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 KBTBD6Q86V97 674 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 CARFQ8N187 725 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 FAM109AQ8N4B1 249 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 MRPS27Q92552 414 aaKnown RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 INTS12Q96CB8 462 aaKnown RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 NAP1L5Q96NT1 182 aaPredicted RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 EPB41L4BQ9H329 900 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 CXorf56Q9H5V9 222 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 SETD4Q9NVD3 440 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 BEX4Q9NWD9 120 aaPredicted RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 ALKBH4Q9NXW9 302 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 CLCA2Q9UQC9 943 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 ARHGAP23Q9P227 1491 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 CCDC196A0A1B0GTZ2 297 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 H3BQ06 376 aaPredicted RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 MGAT1P26572 445 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 CTGFP29279 349 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 CDH8P55286 799 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 RBM6P78332 1123 aaKnown RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 ARHGAP8P85298 464 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 PSG6Q00889 435 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 PIGFQ07326 219 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 AP1B1Q10567 949 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 TUBB3Q13509 450 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 DYRK1AQ13627 763 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 E2F2Q14209 437 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 CCDC92Q53HC0 331 aaPredicted RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 INO80CQ6PI98 192 aaPredicted RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 MAMDC4Q6UXC1 1216 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 TDRPQ86YL5 185 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 SCN4BQ8IWT1 228 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 CCDC13Q8IYE1 715 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 BHLHE22Q8NFJ8 381 aaPredicted RBP1.76□□□□□ -2.13
BRCA1-202ENST00000354071 SNX19Q92543 992 aa1.76□□□□□ -2.13
BRCA1-202ENST00000354071 KLHL29Q96CT2 875 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms