RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 CENPSQ8N2Z9 138 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 ZNF512Q96ME7 567 aaPredicted RBP15.28■□□□□ 0.04
TRAF3-202ENST00000351691 PPP1R10Q96QC0 940 aaKnown RBP15.28■□□□□ 0.04
TRAF3-202ENST00000351691 WRNIP1Q96S55 665 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 TDRD1Q9BXT4 1180 aaKnown RBP15.28■□□□□ 0.04
TRAF3-202ENST00000351691 NRBP2Q9NSY0 501 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 HACD3Q9P035 362 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 TMEM98Q9Y2Y6 226 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 NUB1Q9Y5A7 615 aa15.28■□□□□ 0.04
TRAF3-202ENST00000351691 ADGRA2Q96PE1 1338 aa15.27■□□□□ 0.04
TRAF3-202ENST00000351691 XPO1O14980 1071 aaKnown RBP15.27■□□□□ 0.04
TRAF3-202ENST00000351691 ALDH1A2O94788 518 aa15.27■□□□□ 0.04
TRAF3-202ENST00000351691 PRKCGP05129 697 aa15.27■□□□□ 0.04
TRAF3-202ENST00000351691 KRT3P12035 628 aa15.27■□□□□ 0.04
TRAF3-202ENST00000351691 TPSB2P20231 275 aa15.27■□□□□ 0.04
TRAF3-202ENST00000351691 RFC1P35251 1148 aaPredicted RBP15.27■□□□□ 0.04
TRAF3-202ENST00000351691 PSMD8P48556 350 aa15.27■□□□□ 0.04
TRAF3-202ENST00000351691 ACOT2P49753 483 aa15.27■□□□□ 0.04
TRAF3-202ENST00000351691 HMGCS2P54868 508 aa15.27■□□□□ 0.04
TRAF3-202ENST00000351691 TPSAB1Q15661 275 aa15.27■□□□□ 0.04
TRAF3-202ENST00000351691 MOGQ16653 247 aa15.27■□□□□ 0.04
TRAF3-202ENST00000351691 VWA5B1Q5TIE3 1220 aa15.27■□□□□ 0.04
TRAF3-202ENST00000351691 ITPRIPL1Q6GPH6 555 aa15.27■□□□□ 0.04
TRAF3-202ENST00000351691 MAMDC4Q6UXC1 1216 aa15.27■□□□□ 0.04
TRAF3-202ENST00000351691 APOBEC3FQ8IUX4 373 aaKnown RBP15.27■□□□□ 0.04
TRAF3-202ENST00000351691 FIBCD1Q8N539 461 aa15.27■□□□□ 0.04
TRAF3-202ENST00000351691 WDTC1Q8N5D0 677 aa15.27■□□□□ 0.04
TRAF3-202ENST00000351691 SLC4A11Q8NBS3 891 aa15.27■□□□□ 0.04
TRAF3-202ENST00000351691 TBC1D15Q8TC07 691 aa15.27■□□□□ 0.04
TRAF3-202ENST00000351691 UHRF1Q96T88 793 aaPredicted RBP15.27■□□□□ 0.04
TRAF3-202ENST00000351691 GPATCH1Q9BRR8 931 aaKnown RBP15.27■□□□□ 0.04
TRAF3-202ENST00000351691 PAIP1Q9H074 479 aaKnown RBP15.27■□□□□ 0.04
TRAF3-202ENST00000351691 PRDM16Q9HAZ2 1276 aa15.27■□□□□ 0.04
TRAF3-202ENST00000351691 DOCK5Q9H7D0 1870 aa15.27■□□□□ 0.04
TRAF3-202ENST00000351691 CNTNAP2Q9UHC6 1331 aa15.27■□□□□ 0.03
TRAF3-202ENST00000351691 BCLAF3A2AJT9 711 aaKnown RBP15.27■□□□□ 0.03
TRAF3-202ENST00000351691 LRRIQ4A6NIV6 560 aa15.27■□□□□ 0.03
TRAF3-202ENST00000351691 PSMD12O00232 456 aaPredicted RBP15.27■□□□□ 0.03
TRAF3-202ENST00000351691 TADA2AO75478 443 aa15.27■□□□□ 0.03
TRAF3-202ENST00000351691 CDH3P22223 829 aa15.27■□□□□ 0.03
TRAF3-202ENST00000351691 ARRB2P32121 409 aa15.27■□□□□ 0.03
TRAF3-202ENST00000351691 GMPSP49915 693 aaPredicted RBP15.27■□□□□ 0.03
TRAF3-202ENST00000351691 RPS3AP61247 264 aaKnown RBP15.27■□□□□ 0.03
TRAF3-202ENST00000351691 SURF1Q15526 300 aa15.27■□□□□ 0.03
TRAF3-202ENST00000351691 ANKDD1AQ495B1 522 aa15.27■□□□□ 0.03
TRAF3-202ENST00000351691 TRMT10BQ6PF06 316 aaKnown RBP15.27■□□□□ 0.03
TRAF3-202ENST00000351691 SNX32Q86XE0 403 aa15.27■□□□□ 0.03
TRAF3-202ENST00000351691 TNIP2Q8NFZ5 429 aa15.27■□□□□ 0.03
TRAF3-202ENST00000351691 TMEM143Q96AN5 459 aa15.27■□□□□ 0.03
TRAF3-202ENST00000351691 THAP11Q96EK4 314 aa15.27■□□□□ 0.03
TRAF3-202ENST00000351691 CNDP2Q96KP4 475 aaKnown RBP15.27■□□□□ 0.03
TRAF3-202ENST00000351691 SNX27Q96L92 541 aa15.27■□□□□ 0.03
TRAF3-202ENST00000351691 KLHL32Q96NJ5 620 aa15.27■□□□□ 0.03
TRAF3-202ENST00000351691 TMEM79Q9BSE2 394 aa15.27■□□□□ 0.03
TRAF3-202ENST00000351691 IMPG2Q9BZV3 1241 aa15.27■□□□□ 0.03
TRAF3-202ENST00000351691 HAPLN2Q9GZV7 340 aa15.27■□□□□ 0.03
TRAF3-202ENST00000351691 ZNF385DQ9H6B1 395 aa15.27■□□□□ 0.03
TRAF3-202ENST00000351691 COQ10BQ9H8M1 238 aa15.27■□□□□ 0.03
TRAF3-202ENST00000351691 SCHIP1Q9P0W5 487 aaPredicted RBP15.27■□□□□ 0.03
TRAF3-202ENST00000351691 EBF1Q9UH73 591 aa15.27■□□□□ 0.03
TRAF3-202ENST00000351691 KAT6AQ92794 2004 aa15.27■□□□□ 0.03
TRAF3-202ENST00000351691 LTBP3Q9NS15 1303 aa15.26■□□□□ 0.03
TRAF3-202ENST00000351691 H7C0C1 242 aa15.26■□□□□ 0.03
TRAF3-202ENST00000351691 TRIM38O00635 465 aa15.26■□□□□ 0.03
TRAF3-202ENST00000351691 SULT1C4O75897 302 aa15.26■□□□□ 0.03
TRAF3-202ENST00000351691 TRUB2O95900 331 aaKnown RBP15.26■□□□□ 0.03
TRAF3-202ENST00000351691 FUCA1P04066 466 aa15.26■□□□□ 0.03
TRAF3-202ENST00000351691 ALDOAP04075 364 aaKnown RBP15.26■□□□□ 0.03
TRAF3-202ENST00000351691 MCF2P10911 925 aa15.26■□□□□ 0.03
TRAF3-202ENST00000351691 DCKP27707 260 aa15.26■□□□□ 0.03
TRAF3-202ENST00000351691 ATP5OP48047 213 aa15.26■□□□□ 0.03
TRAF3-202ENST00000351691 TMED10P49755 219 aaKnown RBP15.26■□□□□ 0.03
TRAF3-202ENST00000351691 SP4Q02446 784 aa15.26■□□□□ 0.03
TRAF3-202ENST00000351691 NIPAL4Q0D2K0 466 aa15.26■□□□□ 0.03
TRAF3-202ENST00000351691 KCNT1Q5JUK3 1230 aa15.26■□□□□ 0.03
TRAF3-202ENST00000351691 NOL9Q5SY16 702 aaKnown RBP15.26■□□□□ 0.03
TRAF3-202ENST00000351691 LMBRD2Q68DH5 695 aaPredicted RBP15.26■□□□□ 0.03
TRAF3-202ENST00000351691 ZNF354CQ86Y25 554 aa15.26■□□□□ 0.03
TRAF3-202ENST00000351691 BRSK2Q8IWQ3 736 aa15.26■□□□□ 0.03
TRAF3-202ENST00000351691 CNTD1Q8N815 330 aa15.26■□□□□ 0.03
TRAF3-202ENST00000351691 SLC4A5Q9BY07 1137 aa15.26■□□□□ 0.03
TRAF3-202ENST00000351691 UNKQ9C0B0 810 aaKnown RBP15.26■□□□□ 0.03
TRAF3-202ENST00000351691 TCF7L2Q9NQB0 619 aa15.26■□□□□ 0.03
TRAF3-202ENST00000351691 SUN2Q9UH99 717 aa15.26■□□□□ 0.03
TRAF3-202ENST00000351691 PTPRJQ12913 1337 aa15.26■□□□□ 0.03
TRAF3-202ENST00000351691 KLHL41O60662 606 aa15.25■□□□□ 0.03
TRAF3-202ENST00000351691 ZBTB11O95625 1053 aaPredicted RBP15.25■□□□□ 0.03
TRAF3-202ENST00000351691 TOP3BO95985 862 aaKnown RBP15.25■□□□□ 0.03
TRAF3-202ENST00000351691 EIF2S1P05198 315 aaKnown RBP15.25■□□□□ 0.03
TRAF3-202ENST00000351691 EFNA5P52803 228 aa15.25■□□□□ 0.03
TRAF3-202ENST00000351691 NRLP54845 237 aa15.25■□□□□ 0.03
TRAF3-202ENST00000351691 WNT7BP56706 349 aa15.25■□□□□ 0.03
TRAF3-202ENST00000351691 TARBP2Q15633 366 aaKnown RBP15.25■□□□□ 0.03
TRAF3-202ENST00000351691 SLC9B1Q4ZJI4 515 aa15.25■□□□□ 0.03
TRAF3-202ENST00000351691 FAM160B1Q5W0V3 765 aa15.25■□□□□ 0.03
TRAF3-202ENST00000351691 GPAT2Q6NUI2 795 aa15.25■□□□□ 0.03
TRAF3-202ENST00000351691 WDR49Q8IV35 697 aa15.25■□□□□ 0.03
TRAF3-202ENST00000351691 OLFM1Q99784 485 aa15.25■□□□□ 0.03
TRAF3-202ENST00000351691 TARS2Q9BW92 718 aaKnown RBP15.25■□□□□ 0.03
TRAF3-202ENST00000351691 XPNPEP3Q9NQH7 507 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms