RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 SNTG2Q9NY99 539 aa15.03■□□□□ -0
NUP50-201ENST00000347635 ZNF180Q9UJW8 692 aa15.03■□□□□ -0
NUP50-201ENST00000347635 TRHDEQ9UKU6 1024 aa15.03■□□□□ -0
NUP50-201ENST00000347635 USP54Q70EL1 1684 aa15.03■□□□□ -0
NUP50-201ENST00000347635 PIGNO95427 931 aa15.03■□□□□ -0
NUP50-201ENST00000347635 LRG1P02750 347 aa15.03■□□□□ -0
NUP50-201ENST00000347635 SMIM10L2AP0DMW4 78 aa15.03■□□□□ -0
NUP50-201ENST00000347635 SMIM10L2BP0DMW5 78 aa15.03■□□□□ -0
NUP50-201ENST00000347635 SERPINB10P48595 397 aa15.03■□□□□ -0
NUP50-201ENST00000347635 ATP6V0D2Q8N8Y2 350 aa15.03■□□□□ -0
NUP50-201ENST00000347635 USP6NLQ92738 828 aa15.03■□□□□ -0
NUP50-201ENST00000347635 MAML3Q96JK9 1138 aa15.03■□□□□ -0
NUP50-201ENST00000347635 CPXM1Q96SM3 734 aa15.03■□□□□ -0
NUP50-201ENST00000347635 FTHL17Q9BXU8 183 aa15.03■□□□□ -0
NUP50-201ENST00000347635 BRD8Q9H0E9 1235 aa15.03■□□□□ -0
NUP50-201ENST00000347635 TRPC7Q9HCX4 862 aa15.03■□□□□ -0
NUP50-201ENST00000347635 V9GYQ6 96 aa15.03■□□□□ -0
NUP50-201ENST00000347635 SMIM31A0A1B0GVY4 71 aa15.03■□□□□ -0
NUP50-201ENST00000347635 NR5A2O00482 541 aa15.03■□□□□ -0
NUP50-201ENST00000347635 HARS2P49590 506 aaKnown RBP15.03■□□□□ -0
NUP50-201ENST00000347635 TKTL1P51854 596 aa15.03■□□□□ -0
NUP50-201ENST00000347635 GDF10P55107 478 aa15.03■□□□□ -0
NUP50-201ENST00000347635 TUBGCP3Q96CW5 907 aa15.03■□□□□ -0
NUP50-201ENST00000347635 PRPF18Q99633 342 aaKnown RBP15.03■□□□□ -0
NUP50-201ENST00000347635 SEZ6LQ9BYH1 1024 aa15.03■□□□□ -0
NUP50-201ENST00000347635 NKX1-2Q9UD57 310 aaPredicted RBP15.03■□□□□ -0
NUP50-201ENST00000347635 PCDHB12Q9Y5F1 795 aa15.03■□□□□ -0
NUP50-201ENST00000347635 AMHP03971 560 aa15.03■□□□□ -0
NUP50-201ENST00000347635 UQCRBP14927 111 aa15.03■□□□□ -0
NUP50-201ENST00000347635 ACO1P21399 889 aaKnown RBP15.03■□□□□ -0
NUP50-201ENST00000347635 CWF19L1Q69YN2 538 aaKnown RBP15.03■□□□□ -0
NUP50-201ENST00000347635 PACS1Q6VY07 963 aa15.03■□□□□ -0
NUP50-201ENST00000347635 CEP19Q96LK0 163 aa15.03■□□□□ -0
NUP50-201ENST00000347635 UROC1Q96N76 676 aa15.03■□□□□ -0
NUP50-201ENST00000347635 CDK5RAP1Q96SZ6 601 aaKnown RBP15.03■□□□□ -0
NUP50-201ENST00000347635 TMEM39AQ9NV64 488 aa15.03■□□□□ -0
NUP50-201ENST00000347635 RIC8BQ9NVN3 520 aa15.03■□□□□ -0
NUP50-201ENST00000347635 CST3P01034 146 aaPredicted RBP15.02■□□□□ -0
NUP50-201ENST00000347635 CCDC130P13994 396 aa15.02■□□□□ -0
NUP50-201ENST00000347635 NME5P56597 212 aa15.02■□□□□ -0
NUP50-201ENST00000347635 FASTKQ14296 549 aaKnown RBP15.02■□□□□ -0
NUP50-201ENST00000347635 FAM117BQ6P1L5 589 aa15.02■□□□□ -0
NUP50-201ENST00000347635 EFCAB3Q8N7B9 438 aa15.02■□□□□ -0
NUP50-201ENST00000347635 TERB1Q8NA31 727 aa15.02■□□□□ -0
NUP50-201ENST00000347635 DIS3LQ8TF46 1054 aaKnown RBP15.02■□□□□ -0
NUP50-201ENST00000347635 YME1L1Q96TA2 773 aa15.02■□□□□ -0
NUP50-201ENST00000347635 GMLQ99445 158 aa15.02■□□□□ -0
NUP50-201ENST00000347635 GORASP1Q9BQQ3 440 aa15.02■□□□□ -0
NUP50-201ENST00000347635 MRPS26Q9BYN8 205 aaKnown RBP15.02■□□□□ -0
NUP50-201ENST00000347635 TXLNGYQ9BZA5 131 aa15.02■□□□□ -0
NUP50-201ENST00000347635 RRN3Q9NYV6 651 aa15.02■□□□□ -0
NUP50-201ENST00000347635 ADGRA2Q96PE1 1338 aa15.02■□□□□ -0
NUP50-201ENST00000347635 USP12O75317 370 aa15.02■□□□□ -0
NUP50-201ENST00000347635 NDUFS3O75489 264 aa15.02■□□□□ -0
NUP50-201ENST00000347635 FARP2O94887 1054 aaPredicted RBP15.02■□□□□ -0
NUP50-201ENST00000347635 CRABP2P29373 138 aa15.02■□□□□ -0
NUP50-201ENST00000347635 FOLH1Q04609 750 aa15.02■□□□□ -0
NUP50-201ENST00000347635 ISLR2Q6UXK2 745 aa15.02■□□□□ -0
NUP50-201ENST00000347635 SLC22A9Q8IVM8 553 aa15.02■□□□□ -0
NUP50-201ENST00000347635 TNIP2Q8NFZ5 429 aa15.02■□□□□ -0
NUP50-201ENST00000347635 ZSCAN18Q8TBC5 510 aaPredicted RBP15.02■□□□□ -0
NUP50-201ENST00000347635 CDT1Q9H211 546 aa15.02■□□□□ -0
NUP50-201ENST00000347635 C6orf203Q9P0P8 240 aaPredicted RBP15.02■□□□□ -0
NUP50-201ENST00000347635 MYRFQ9Y2G1 1151 aa15.02■□□□□ -0
NUP50-201ENST00000347635 TJP1Q07157 1748 aa15.02■□□□□ -0
NUP50-201ENST00000347635 PGM3O95394 542 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 CD48P09326 243 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 HMOX2P30519 316 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 MRPS6P82932 125 aaKnown RBP15.02□□□□□ -0.01
NUP50-201ENST00000347635 CTXN3Q4LDR2 81 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 TBCELQ5QJ74 424 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 TIGD7Q6NT04 549 aaPredicted RBP15.02□□□□□ -0.01
NUP50-201ENST00000347635 DHFR2Q86XF0 187 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 FBXW8Q8N3Y1 598 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 DDHD1Q8NEL9 900 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 OR52K1Q8NGK4 314 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 C7orf43Q8WVR3 580 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 CLEC4DQ8WXI8 215 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 CCDC28BQ9BUN5 200 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 PNPOQ9NVS9 261 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 SEPT3Q9UH03 358 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 CROTQ9UKG9 612 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 SH3BP1Q9Y3L3 701 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 SAC3D1A6NKF1 404 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 CD151P48509 253 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 KPNA1P52294 538 aaPredicted RBP15.02□□□□□ -0.01
NUP50-201ENST00000347635 HIRAP54198 1017 aaPredicted RBP15.02□□□□□ -0.01
NUP50-201ENST00000347635 POU6F1Q14863 301 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 TMEM86AQ8N2M4 240 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 LMO3Q8TAP4 145 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 GANCQ8TET4 914 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 LZICQ8WZA0 190 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 PCDH18Q9HCL0 1135 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 LTBP4Q8N2S1 1624 aa15.02□□□□□ -0.01
NUP50-201ENST00000347635 TSTA3Q13630 321 aaPredicted RBP15.01□□□□□ -0.01
NUP50-201ENST00000347635 FUT11Q495W5 492 aa15.01□□□□□ -0.01
NUP50-201ENST00000347635 C6orf10Q5SRN2 563 aa15.01□□□□□ -0.01
NUP50-201ENST00000347635 ZNF333Q96JL9 665 aa15.01□□□□□ -0.01
NUP50-201ENST00000347635 KDM1AO60341 852 aa15.01□□□□□ -0.01
NUP50-201ENST00000347635 PTPN7P35236 360 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms