RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 AGBL2Q5U5Z8 902 aa22■■□□□ 1.11
TSPAN3-202ENST00000346495 ITPRIPL1Q6GPH6 555 aa22■■□□□ 1.11
TSPAN3-202ENST00000346495 RTL10Q7L3V2 364 aa22■■□□□ 1.11
TSPAN3-202ENST00000346495 PYROXD1Q8WU10 500 aa22■■□□□ 1.11
TSPAN3-202ENST00000346495 SERPINB12Q96P63 405 aa22■■□□□ 1.11
TSPAN3-202ENST00000346495 CEP41Q9BYV8 373 aa22■■□□□ 1.11
TSPAN3-202ENST00000346495 RETREG1Q9H6L5 497 aa22■■□□□ 1.11
TSPAN3-202ENST00000346495 GOLGA6AQ9NYA3 693 aa22■■□□□ 1.11
TSPAN3-202ENST00000346495 A0A087WUV0 522 aaPredicted RBP21.99■■□□□ 1.11
TSPAN3-202ENST00000346495 GOLGA6L7A0A1B0GV03 622 aa21.99■■□□□ 1.11
TSPAN3-202ENST00000346495 CNTN5O94779 1100 aa21.99■■□□□ 1.11
TSPAN3-202ENST00000346495 MBL2P11226 248 aaPredicted RBP21.99■■□□□ 1.11
TSPAN3-202ENST00000346495 ALFQ53S48 1182 aa21.99■■□□□ 1.11
TSPAN3-202ENST00000346495 MICAL1Q8TDZ2 1067 aa21.99■■□□□ 1.11
TSPAN3-202ENST00000346495 SAMD11Q96NU1 681 aa21.99■■□□□ 1.11
TSPAN3-202ENST00000346495 CCDC77Q9BR77 488 aa21.99■■□□□ 1.11
TSPAN3-202ENST00000346495 CENPHQ9H3R5 247 aa21.99■■□□□ 1.11
TSPAN3-202ENST00000346495 NYNRINQ9P2P1 1898 aaKnown RBP21.99■■□□□ 1.11
TSPAN3-202ENST00000346495 DENND4CQ5VZ89 1909 aa21.99■■□□□ 1.11
TSPAN3-202ENST00000346495 MAFKO60675 156 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 C1RP00736 705 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 TSHRP16473 764 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 PSMB4P28070 264 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 GABRR2P28476 465 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 CORO1AP31146 461 aaKnown RBP21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 MAPKAPK2P49137 400 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 IRAK1P51617 712 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 CLCN4P51793 760 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 ZBTB17Q13105 803 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 STAT4Q14765 748 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 DNAJC21Q5F1R6 531 aaKnown RBP21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 HP1BP3Q5SSJ5 553 aaPredicted RBP21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 C6orf118Q5T5N4 469 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 TFAP2DQ7Z6R9 452 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 ANKMY2Q8IV38 441 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 LGI2Q8N0V4 545 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 MRPS31Q92665 395 aaKnown RBP21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 LRRC4CQ9HCJ2 640 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 XAB2Q9HCS7 855 aaKnown RBP21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 TRPC7Q9HCX4 862 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 GKN1Q9NS71 199 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 ARHGAP42A6NI28 874 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 RASGRF2O14827 1237 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 MATN3O15232 486 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 BANF1O75531 89 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 CSPG5O95196 566 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 OLFM2O95897 454 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 IVLP07476 585 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 MYOGP15173 224 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 PAPOLAP51003 745 aaKnown RBP21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 IFI35P80217 286 aaPredicted RBP21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 CCDC38Q502W7 563 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 FAM133BQ5BKY9 247 aaKnown RBP21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 PPM1LQ5SGD2 360 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 C9orf50Q5SZB4 431 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 ARHGAP36Q6ZRI8 547 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 TMC8Q8IU68 726 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 DENND1CQ8IV53 801 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 ATP11CQ8NB49 1132 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 FBXO36Q8NEA4 188 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 TEKT5Q96M29 485 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 DDX50Q9BQ39 737 aaKnown RBP21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 LRRC3Q9BY71 257 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 GBA3Q9H227 469 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 NOL6Q9H6R4 1146 aaKnown RBP21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 RSPH14Q9UHP6 348 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 GBF1Q92538 1859 aa21.98■■□□□ 1.11
TSPAN3-202ENST00000346495 ZBTB24O43167 697 aaPredicted RBP21.97■■□□□ 1.11
TSPAN3-202ENST00000346495 TCEA3O75764 348 aa21.97■■□□□ 1.11
TSPAN3-202ENST00000346495 LATS1O95835 1130 aa21.97■■□□□ 1.11
TSPAN3-202ENST00000346495 JCHAINP01591 159 aa21.97■■□□□ 1.11
TSPAN3-202ENST00000346495 CCNB1P14635 433 aa21.97■■□□□ 1.11
TSPAN3-202ENST00000346495 CDC25CP30307 473 aa21.97■■□□□ 1.11
TSPAN3-202ENST00000346495 SLC6A4P31645 630 aa21.97■■□□□ 1.11
TSPAN3-202ENST00000346495 PHBP35232 272 aa21.97■■□□□ 1.11
TSPAN3-202ENST00000346495 ANO4Q32M45 955 aa21.97■■□□□ 1.11
TSPAN3-202ENST00000346495 RABGAP1LQ5R372 815 aa21.97■■□□□ 1.11
TSPAN3-202ENST00000346495 CAND1Q86VP6 1230 aaKnown RBP21.97■■□□□ 1.11
TSPAN3-202ENST00000346495 LRRC39Q96DD0 335 aa21.97■■□□□ 1.11
TSPAN3-202ENST00000346495 AGAP3Q96P47 875 aa21.97■■□□□ 1.11
TSPAN3-202ENST00000346495 GCNAQ96QF7 691 aa21.97■■□□□ 1.11
TSPAN3-202ENST00000346495 VPS37BQ9H9H4 285 aa21.97■■□□□ 1.11
TSPAN3-202ENST00000346495 BCCIPQ9P287 314 aaKnown RBP eCLIP21.97■■□□□ 1.11
TSPAN3-202ENST00000346495 ZNF212Q9UDV6 495 aa21.97■■□□□ 1.11
TSPAN3-202ENST00000346495 TEX264Q9Y6I9 313 aa21.97■■□□□ 1.11
TSPAN3-202ENST00000346495 TLDC2A0PJX2 215 aa21.96■■□□□ 1.11
TSPAN3-202ENST00000346495 GRXCR1A8MXD5 290 aa21.96■■□□□ 1.11
TSPAN3-202ENST00000346495 GRM6O15303 877 aa21.96■■□□□ 1.11
TSPAN3-202ENST00000346495 ARHGEF15O94989 841 aa21.96■■□□□ 1.11
TSPAN3-202ENST00000346495 KLKB1P03952 638 aa21.96■■□□□ 1.11
TSPAN3-202ENST00000346495 IRF1P10914 325 aa21.96■■□□□ 1.11
TSPAN3-202ENST00000346495 MLNP12872 115 aa21.96■■□□□ 1.11
TSPAN3-202ENST00000346495 HDCP19113 662 aa21.96■■□□□ 1.11
TSPAN3-202ENST00000346495 KCTD16Q68DU8 428 aa21.96■■□□□ 1.11
TSPAN3-202ENST00000346495 PDE12Q6L8Q7 609 aaKnown RBP21.96■■□□□ 1.11
TSPAN3-202ENST00000346495 PALM2Q8IXS6 379 aa21.96■■□□□ 1.11
TSPAN3-202ENST00000346495 HS6ST3Q8IZP7 471 aa21.96■■□□□ 1.11
TSPAN3-202ENST00000346495 PDCD7Q8N8D1 485 aaKnown RBP21.96■■□□□ 1.11
TSPAN3-202ENST00000346495 FAM76AQ8TAV0 307 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms