RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 WDCPQ9H6R7 721 aa14.88□□□□□ -0.03
HMGN3-202ENST00000344726 RTN4Q9NQC3 1192 aaKnown RBP14.88□□□□□ -0.03
HMGN3-202ENST00000344726 METTL5Q9NRN9 209 aaKnown RBP14.88□□□□□ -0.03
HMGN3-202ENST00000344726 KIAA1522Q9P206 1035 aaPredicted RBP14.88□□□□□ -0.03
HMGN3-202ENST00000344726 STAP1Q9ULZ2 295 aa14.88□□□□□ -0.03
HMGN3-202ENST00000344726 SLC6A14Q9UN76 642 aa14.88□□□□□ -0.03
HMGN3-202ENST00000344726 ERVW-1Q9UQF0 538 aa14.88□□□□□ -0.03
HMGN3-202ENST00000344726 TTC34A8MYJ7 566 aa14.87□□□□□ -0.03
HMGN3-202ENST00000344726 CNTN5O94779 1100 aa14.87□□□□□ -0.03
HMGN3-202ENST00000344726 ASLP04424 464 aa14.87□□□□□ -0.03
HMGN3-202ENST00000344726 PDGFRAP16234 1089 aa14.87□□□□□ -0.03
HMGN3-202ENST00000344726 ACSL1P33121 698 aa14.87□□□□□ -0.03
HMGN3-202ENST00000344726 DPP6P42658 865 aa14.87□□□□□ -0.03
HMGN3-202ENST00000344726 STK19P49842 368 aaPredicted RBP14.87□□□□□ -0.03
HMGN3-202ENST00000344726 ZNF165P49910 485 aa14.87□□□□□ -0.03
HMGN3-202ENST00000344726 NOVA1P51513 510 aaKnown RBP14.87□□□□□ -0.03
HMGN3-202ENST00000344726 RPS14P62263 151 aaKnown RBP14.87□□□□□ -0.03
HMGN3-202ENST00000344726 DEUP1Q05D60 604 aa14.87□□□□□ -0.03
HMGN3-202ENST00000344726 KLHL40Q2TBA0 621 aa14.87□□□□□ -0.03
HMGN3-202ENST00000344726 BRMS1LQ5PSV4 323 aa14.87□□□□□ -0.03
HMGN3-202ENST00000344726 RABGAP1LQ5R372 815 aa14.87□□□□□ -0.03
HMGN3-202ENST00000344726 TTC39BQ5VTQ0 682 aaPredicted RBP14.87□□□□□ -0.03
HMGN3-202ENST00000344726 DCAF12L1Q5VU92 463 aa14.87□□□□□ -0.03
HMGN3-202ENST00000344726 DAB2IPQ5VWQ8 1189 aa14.87□□□□□ -0.03
HMGN3-202ENST00000344726 CCDC117Q8IWD4 279 aaPredicted RBP14.87□□□□□ -0.03
HMGN3-202ENST00000344726 ZNF683Q8IZ20 524 aa14.87□□□□□ -0.03
HMGN3-202ENST00000344726 MSANTD4Q8NCY6 345 aa14.87□□□□□ -0.03
HMGN3-202ENST00000344726 JOSD2Q8TAC2 188 aa14.87□□□□□ -0.03
HMGN3-202ENST00000344726 CEP76Q8TAP6 659 aa14.87□□□□□ -0.03
HMGN3-202ENST00000344726 ALG14Q96F25 216 aa14.87□□□□□ -0.03
HMGN3-202ENST00000344726 RPL10LQ96L21 214 aaKnown RBP14.87□□□□□ -0.03
HMGN3-202ENST00000344726 GTPBP2Q9BX10 602 aaKnown RBP14.87□□□□□ -0.03
HMGN3-202ENST00000344726 SLCO3A1Q9UIG8 710 aa14.87□□□□□ -0.03
HMGN3-202ENST00000344726 TP53BP1Q12888 1972 aaPredicted RBP14.87□□□□□ -0.03
HMGN3-202ENST00000344726 TPRP12270 2363 aaKnown RBP14.87□□□□□ -0.03
HMGN3-202ENST00000344726 ASPMQ8IZT6 3477 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 SYCE3A1L190 88 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 SMTNL1A8MU46 457 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 METTL12A8MUP2 240 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 SIN3BO75182 1162 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 ACADMP11310 421 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 ECT2LQ008S8 904 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 BNC1Q01954 994 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 CLEC16AQ2KHT3 1053 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 HNRNPA1L2Q32P51 320 aaKnown RBP14.86□□□□□ -0.03
HMGN3-202ENST00000344726 ALFQ53S48 1182 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 TRIM72Q6ZMU5 477 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 ARCQ7LC44 396 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 RGL4Q8IZJ4 473 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 ZCCHC9Q8N567 271 aaKnown RBP14.86□□□□□ -0.03
HMGN3-202ENST00000344726 MINDY1Q8N5J2 469 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 DEFB124Q8NES8 71 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 CADM4Q8NFZ8 388 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 DNASE2BQ8WZ79 361 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 BAP1Q92560 729 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 FOXJ1Q92949 421 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 NAP1L5Q96NT1 182 aaPredicted RBP14.86□□□□□ -0.03
HMGN3-202ENST00000344726 C6orf106Q9H6K1 298 aaPredicted RBP14.86□□□□□ -0.03
HMGN3-202ENST00000344726 SERGEFQ9UGK8 458 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 SUN2Q9UH99 717 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 OR51B4Q9Y5P0 310 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 EPG5Q9HCE0 2579 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 CABIN1Q9Y6J0 2220 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 ITIH6Q6UXX5 1313 aa14.86□□□□□ -0.03
HMGN3-202ENST00000344726 CEP295Q9C0D2 2601 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 PLXNA2O75051 1894 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 TMEM131Q92545 1883 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 MEI4A8MW99 385 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 ARHGAP33O14559 1287 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 GJB3O75712 270 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 ENDOD1O94919 500 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 MOCS3O95396 460 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 F9P00740 461 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 SRPRAP08240 638 aaKnown RBP14.85□□□□□ -0.03
HMGN3-202ENST00000344726 CSRP1P21291 193 aaKnown RBP14.85□□□□□ -0.03
HMGN3-202ENST00000344726 PLK1P53350 603 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 ST8SIA6P61647 398 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 ATP11AP98196 1134 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 GFPT1Q06210 699 aaPredicted RBP14.85□□□□□ -0.03
HMGN3-202ENST00000344726 SEMA3BQ13214 749 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 MTA1Q13330 715 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 SLC12A1Q13621 1099 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 ARID5BQ14865 1188 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 C15orf59Q2T9L4 293 aaPredicted RBP14.85□□□□□ -0.03
HMGN3-202ENST00000344726 CCDC14Q49A88 953 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 C9orf64Q5T6V5 341 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 IRF2BP2Q7Z5L9 587 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 PIP4P1Q86T03 277 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 FAM131BQ86XD5 332 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 KDM1BQ8NB78 822 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 C1orf216Q8TAB5 229 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 RXFP2Q8WXD0 754 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 AGPAT1Q99943 283 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 FEM1AQ9BSK4 669 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 SYT11Q9BT88 431 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 RSPH9Q9H1X1 276 aaPredicted RBP14.85□□□□□ -0.03
HMGN3-202ENST00000344726 FBRSQ9HAH7 460 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 WASF3Q9UPY6 502 aa14.85□□□□□ -0.03
HMGN3-202ENST00000344726 MAP1BP46821 2468 aaKnown RBP14.84□□□□□ -0.03
HMGN3-202ENST00000344726 KMT2BQ9UMN6 2715 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms