RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 GTF2A1P52655 376 aaPredicted RBP16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 KCNMA1Q12791 1236 aa16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 NTPCRQ9BSD7 190 aaKnown RBP16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 RUVBL2Q9Y230 463 aaKnown RBP16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 RAD54BQ9Y620 910 aa16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 MYBPHLA2RUH7 354 aa16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 TRPC5OSA6NMA1 111 aa16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 ERVK-10P10266 1014 aa16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 HOXB8P17481 243 aaPredicted RBP16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 PGAM1P18669 254 aa16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 GDI1P31150 447 aa16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 FMO1Q01740 532 aa16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 PRR23BQ6ZRT6 265 aa16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 FAR2Q96K12 515 aa16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 MINDY3Q9H8M7 445 aa16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 PLCH1Q4KWH8 1693 aa16.73■□□□□ 0.27
SMARCA4-201ENST00000344626 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 PYGMP11217 842 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 SLC5A3P53794 718 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 CYP4F8P98187 520 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 MPPE1Q53F39 396 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 SLC26A11Q86WA9 606 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 ACOT9Q9Y305 439 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 COL2A1P02458 1487 aaPredicted RBP16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 PDE2AO00408 941 aaPredicted RBP16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 MSI1O43347 362 aaKnown RBP16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 CA3P07451 260 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 SEC13P55735 322 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 KLHL23Q8NBE8 558 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 E2F7Q96AV8 911 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 YY1AP1Q9H869 796 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 GPAMQ9HCL2 828 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 ZNF839A8K0R7 811 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 DYRK3O43781 588 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 LMNAP02545 664 aaKnown RBP16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 CD151P48509 253 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 SERPINB4P48594 390 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 PRKAA1Q13131 559 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 C2orf27AQ580R0 203 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 FAM43BQ6ZT52 329 aaPredicted RBP16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 NLRP14Q86W24 1093 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 FAM9CQ8IZT9 166 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 STK40Q8N2I9 435 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 CASKIN2Q8WXE0 1202 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 EXOC2Q96KP1 924 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 ZNF670Q9BS34 389 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 L1RE1Q9UN81 338 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 KDM3BQ7LBC6 1761 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 TP53BP2Q13625 1128 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 CBX2Q14781 532 aaPredicted RBP16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 SGO1Q5FBB7 561 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 PDPK2PQ6A1A2 396 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 SERINC5Q86VE9 423 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 NOA1Q8NC60 698 aaKnown RBP16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 PRMT1Q99873 361 aaKnown RBP16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 TMEM175Q9BSA9 504 aa16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 SNRNP25Q9BV90 132 aaKnown RBP16.72■□□□□ 0.27
SMARCA4-201ENST00000344626 TRPM3Q9HCF6 1732 aaPredicted RBP16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 MAPK1P28482 360 aa16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 SLC11A1P49279 550 aa16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 GRSF1Q12849 480 aaKnown RBP eCLIP16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 PTPRJQ12913 1337 aa16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 ATP4AP20648 1035 aa16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 CORO1AP31146 461 aaKnown RBP16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 GRM3Q14832 879 aa16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 C6orf10Q5SRN2 563 aa16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 TMCO2Q7Z6W1 182 aaPredicted RBP16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 KLF6Q99612 283 aaPredicted RBP16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 MAN1C1Q9NR34 630 aa16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 CTNNAL1Q9UBT7 734 aa16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 ADAM21Q9UKJ8 722 aa16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 TCP11X1B4DZS4 312 aa16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 CHN1P15882 459 aa16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 ERVK-21P61565 698 aa16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 MORN1Q5T089 497 aa16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 RFX8Q6ZV50 586 aa16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 POLNQ7Z5Q5 900 aa16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 BTN2A3PQ96KV6 586 aa16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 RGS18Q9NS28 235 aa16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 DNALI1O14645 258 aaPredicted RBP16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 ALOX15P16050 662 aaPredicted RBP16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 WARSP23381 471 aaKnown RBP16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 SERPINH1P50454 418 aaKnown RBP16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 KRT72Q14CN4 511 aa16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 SLC25A52Q3SY17 297 aa16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 ZNF438Q7Z4V0 828 aa16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 SPATA20Q8TB22 786 aa16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 CYLDQ9NQC7 956 aa16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 MAP10Q9P2G4 905 aa16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 ITM2BQ9Y287 266 aa16.71■□□□□ 0.27
SMARCA4-201ENST00000344626 TTC36A6NLP5 189 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 H3BMM5 538 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 C21orf59P57076 290 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 DDX39BQ13838 428 aaKnown RBP16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 LVRNQ6Q4G3 990 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 OTOAQ7RTW8 1153 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 SPATA21Q7Z572 469 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 PCYOX1LQ8NBM8 494 aa16.7■□□□□ 0.26
SMARCA4-201ENST00000344626 B3GNT5Q9BYG0 378 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms