RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 LRSAM1Q6UWE0 723 aa20.63■□□□□ 0.89
CEACAM3-201ENST00000344550 MMS22LQ6ZRQ5 1243 aa20.63■□□□□ 0.89
CEACAM3-201ENST00000344550 SETD3Q86TU7 594 aaPredicted RBP20.63■□□□□ 0.89
CEACAM3-201ENST00000344550 APCDD1Q8J025 514 aa20.63■□□□□ 0.89
CEACAM3-201ENST00000344550 DEFB119Q8N690 84 aa20.63■□□□□ 0.89
CEACAM3-201ENST00000344550 IGSF8Q969P0 613 aa20.63■□□□□ 0.89
CEACAM3-201ENST00000344550 ERLEC1Q96DZ1 483 aa20.63■□□□□ 0.89
CEACAM3-201ENST00000344550 FEM1AQ9BSK4 669 aa20.63■□□□□ 0.89
CEACAM3-201ENST00000344550 PABPC3Q9H361 631 aaKnown RBP20.63■□□□□ 0.89
CEACAM3-201ENST00000344550 TMEM63CQ9P1W3 806 aa20.63■□□□□ 0.89
CEACAM3-201ENST00000344550 FZD4Q9ULV1 537 aa20.63■□□□□ 0.89
CEACAM3-201ENST00000344550 IGLV3-10A0A075B6K4 115 aa20.62■□□□□ 0.89
CEACAM3-201ENST00000344550 EPHB6O15197 1021 aa20.62■□□□□ 0.89
CEACAM3-201ENST00000344550 SIN3BO75182 1162 aa20.62■□□□□ 0.89
CEACAM3-201ENST00000344550 ADCY5O95622 1261 aa20.62■□□□□ 0.89
CEACAM3-201ENST00000344550 UNGP13051 313 aaPredicted RBP20.62■□□□□ 0.89
CEACAM3-201ENST00000344550 CHRNB2P17787 502 aa20.62■□□□□ 0.89
CEACAM3-201ENST00000344550 FLT3P36888 993 aa20.62■□□□□ 0.89
CEACAM3-201ENST00000344550 KLK7P49862 253 aa20.62■□□□□ 0.89
CEACAM3-201ENST00000344550 CENPCQ03188 943 aa20.62■□□□□ 0.89
CEACAM3-201ENST00000344550 HNRNPDQ14103 355 aaKnown RBP20.62■□□□□ 0.89
CEACAM3-201ENST00000344550 DCAF12L1Q5VU92 463 aa20.62■□□□□ 0.89
CEACAM3-201ENST00000344550 ZNF783Q6ZMS7 281 aa20.62■□□□□ 0.89
CEACAM3-201ENST00000344550 DSG4Q86SJ6 1040 aa20.62■□□□□ 0.89
CEACAM3-201ENST00000344550 HDDC3Q8N4P3 179 aa20.62■□□□□ 0.89
CEACAM3-201ENST00000344550 ZNF366Q8N895 744 aa20.62■□□□□ 0.89
CEACAM3-201ENST00000344550 ALG14Q96F25 216 aa20.62■□□□□ 0.89
CEACAM3-201ENST00000344550 TBCBQ99426 244 aa20.62■□□□□ 0.89
CEACAM3-201ENST00000344550 DNAAF2Q9NVR5 837 aaKnown RBP20.62■□□□□ 0.89
CEACAM3-201ENST00000344550 ADAMTS1Q9UHI8 967 aa20.62■□□□□ 0.89
CEACAM3-201ENST00000344550 OR51B4Q9Y5P0 310 aa20.62■□□□□ 0.89
CEACAM3-201ENST00000344550 ATXN2Q99700 1313 aaKnown RBP20.61■□□□□ 0.89
CEACAM3-201ENST00000344550 CXorf51AA0A1B0GTR3 108 aa20.61■□□□□ 0.89
CEACAM3-201ENST00000344550 BCAT2O15382 392 aaPredicted RBP20.61■□□□□ 0.89
CEACAM3-201ENST00000344550 ATP9BO43861 1147 aa20.61■□□□□ 0.89
CEACAM3-201ENST00000344550 SEMA4FO95754 770 aa20.61■□□□□ 0.89
CEACAM3-201ENST00000344550 ADH1BP00325 375 aa20.61■□□□□ 0.89
CEACAM3-201ENST00000344550 CALB1P05937 261 aa20.61■□□□□ 0.89
CEACAM3-201ENST00000344550 PDGFRAP16234 1089 aa20.61■□□□□ 0.89
CEACAM3-201ENST00000344550 C5AR1P21730 350 aa20.61■□□□□ 0.89
CEACAM3-201ENST00000344550 NSFP46459 744 aaKnown RBP20.61■□□□□ 0.89
CEACAM3-201ENST00000344550 KRT83P78385 493 aa20.61■□□□□ 0.89
CEACAM3-201ENST00000344550 CST6Q15828 149 aa20.61■□□□□ 0.89
CEACAM3-201ENST00000344550 IL27RAQ6UWB1 636 aa20.61■□□□□ 0.89
CEACAM3-201ENST00000344550 PHF13Q86YI8 300 aaPredicted RBP20.61■□□□□ 0.89
CEACAM3-201ENST00000344550 ZNF683Q8IZ20 524 aa20.61■□□□□ 0.89
CEACAM3-201ENST00000344550 SLC20A1Q8WUM9 679 aa20.61■□□□□ 0.89
CEACAM3-201ENST00000344550 C2orf49Q9BVC5 232 aaPredicted RBP20.61■□□□□ 0.89
CEACAM3-201ENST00000344550 SIK2Q9H0K1 926 aa20.61■□□□□ 0.89
CEACAM3-201ENST00000344550 SLC32A1Q9H598 525 aa20.61■□□□□ 0.89
CEACAM3-201ENST00000344550 SLCO3A1Q9UIG8 710 aa20.61■□□□□ 0.89
CEACAM3-201ENST00000344550 SLC25A13Q9UJS0 675 aa20.61■□□□□ 0.89
CEACAM3-201ENST00000344550 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.61■□□□□ 0.89
CEACAM3-201ENST00000344550 GOLGA8SH3BPF8 625 aa20.6■□□□□ 0.89
CEACAM3-201ENST00000344550 ALOX15BO15296 676 aa20.6■□□□□ 0.89
CEACAM3-201ENST00000344550 OPHN1O60890 802 aa20.6■□□□□ 0.89
CEACAM3-201ENST00000344550 FERP16591 822 aa20.6■□□□□ 0.89
CEACAM3-201ENST00000344550 MZF1P28698 734 aaPredicted RBP20.6■□□□□ 0.89
CEACAM3-201ENST00000344550 PTPN9P43378 593 aa20.6■□□□□ 0.89
CEACAM3-201ENST00000344550 NRG1Q02297 640 aaPredicted RBP20.6■□□□□ 0.89
CEACAM3-201ENST00000344550 SEMA3BQ13214 749 aa20.6■□□□□ 0.89
CEACAM3-201ENST00000344550 ARL13BQ3SXY8 428 aa20.6■□□□□ 0.89
CEACAM3-201ENST00000344550 ANO6Q4KMQ2 910 aa20.6■□□□□ 0.89
CEACAM3-201ENST00000344550 FILIP1LQ4L180 1135 aa20.6■□□□□ 0.89
CEACAM3-201ENST00000344550 C6orf118Q5T5N4 469 aa20.6■□□□□ 0.89
CEACAM3-201ENST00000344550 STRADAQ7RTN6 431 aa20.6■□□□□ 0.89
CEACAM3-201ENST00000344550 AOPEPQ8N6M6 819 aa20.6■□□□□ 0.89
CEACAM3-201ENST00000344550 C1orf216Q8TAB5 229 aa20.6■□□□□ 0.89
CEACAM3-201ENST00000344550 FRS2Q8WU20 508 aa20.6■□□□□ 0.89
CEACAM3-201ENST00000344550 PTPRN2Q92932 1015 aa20.6■□□□□ 0.89
CEACAM3-201ENST00000344550 FAM129BQ96TA1 746 aa20.6■□□□□ 0.89
CEACAM3-201ENST00000344550 ADAM33Q9BZ11 813 aa20.6■□□□□ 0.89
CEACAM3-201ENST00000344550 FBXL12Q9NXK8 326 aa20.6■□□□□ 0.89
CEACAM3-201ENST00000344550 PPARGC1AQ9UBK2 798 aaKnown RBP20.6■□□□□ 0.89
CEACAM3-201ENST00000344550 HS3ST2Q9Y278 367 aa20.6■□□□□ 0.89
CEACAM3-201ENST00000344550 TTC34A8MYJ7 566 aa20.59■□□□□ 0.89
CEACAM3-201ENST00000344550 TFE3P19532 575 aaPredicted RBP20.59■□□□□ 0.89
CEACAM3-201ENST00000344550 SDC4P31431 198 aa20.59■□□□□ 0.89
CEACAM3-201ENST00000344550 ACSL1P33121 698 aa20.59■□□□□ 0.89
CEACAM3-201ENST00000344550 CTSOP43234 321 aaPredicted RBP20.59■□□□□ 0.89
CEACAM3-201ENST00000344550 MAPK8P45983 427 aa20.59■□□□□ 0.89
CEACAM3-201ENST00000344550 CLCN6P51797 869 aa20.59■□□□□ 0.89
CEACAM3-201ENST00000344550 AFF3P51826 1226 aaKnown RBP20.59■□□□□ 0.89
CEACAM3-201ENST00000344550 SHC2P98077 582 aa20.59■□□□□ 0.89
CEACAM3-201ENST00000344550 C1QBPQ07021 282 aaKnown RBP20.59■□□□□ 0.89
CEACAM3-201ENST00000344550 CLEC16AQ2KHT3 1053 aa20.59■□□□□ 0.89
CEACAM3-201ENST00000344550 C14orf80Q86SX3 495 aa20.59■□□□□ 0.89
CEACAM3-201ENST00000344550 DHX40Q8IX18 779 aaKnown RBP20.59■□□□□ 0.89
CEACAM3-201ENST00000344550 MINDY1Q8N5J2 469 aa20.59■□□□□ 0.89
CEACAM3-201ENST00000344550 CENPIQ92674 756 aaPredicted RBP20.59■□□□□ 0.89
CEACAM3-201ENST00000344550 RTN4Q9NQC3 1192 aaKnown RBP20.59■□□□□ 0.89
CEACAM3-201ENST00000344550 ADAM22Q9P0K1 906 aa20.59■□□□□ 0.89
CEACAM3-201ENST00000344550 VPS28Q9UK41 221 aa20.59■□□□□ 0.89
CEACAM3-201ENST00000344550 PCDH15Q96QU1 1955 aa20.59■□□□□ 0.89
CEACAM3-201ENST00000344550 ASCC3Q8N3C0 2202 aaKnown RBP20.58■□□□□ 0.89
CEACAM3-201ENST00000344550 A0A1W2PQC6 194 aa20.58■□□□□ 0.89
CEACAM3-201ENST00000344550 LRRC72A6NJI9 287 aa20.58■□□□□ 0.89
CEACAM3-201ENST00000344550 C2CD4BA6NLJ0 364 aa20.58■□□□□ 0.89
CEACAM3-201ENST00000344550 ZNF883P0CG24 379 aa20.58■□□□□ 0.89
CEACAM3-201ENST00000344550 KRT3P12035 628 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms