RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 SPAG7O75391 227 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 STBD1O95210 358 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 PTPN7P35236 360 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 MAGEA4P43358 317 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 ELP6Q0PNE2 266 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 CBX2Q14781 532 aaPredicted RBP13.08□□□□□ -0.32
LIN54-201ENST00000340417 FSCBQ5H9T9 825 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 VITQ6UXI7 678 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 RFX8Q6ZV50 586 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.08□□□□□ -0.32
LIN54-201ENST00000340417 WFIKKN2Q8TEU8 576 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 SYTL2Q9HCH5 934 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 WRAP73Q9P2S5 460 aaPredicted RBP13.08□□□□□ -0.32
LIN54-201ENST00000340417 ZFP37Q9Y6Q3 630 aaPredicted RBP13.08□□□□□ -0.32
LIN54-201ENST00000340417 PPFIA2O75334 1257 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 PCNAP12004 261 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 FNTAP49354 379 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 SLC25A52Q3SY17 297 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 DET1Q7L5Y6 550 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 ZSCAN18Q8TBC5 510 aaPredicted RBP13.08□□□□□ -0.32
LIN54-201ENST00000340417 MBOAT7Q96N66 472 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 SEMA3CQ99985 751 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 TMPRSS4Q9NRS4 437 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 PHPT1Q9NRX4 125 aaPredicted RBP13.08□□□□□ -0.32
LIN54-201ENST00000340417 CNTN3Q9P232 1028 aa13.08□□□□□ -0.32
LIN54-201ENST00000340417 C1orf232A0A0U1RR37 186 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 C5orf58C9J3I9 102 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 H3BM21 787 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 SEC31AO94979 1220 aaKnown RBP13.07□□□□□ -0.32
LIN54-201ENST00000340417 MORF4L2Q15014 288 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 STK38LQ9Y2H1 464 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 SKP1P63208 163 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 TP53BP2Q13625 1128 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 COL9A3Q14050 684 aaPredicted RBP13.07□□□□□ -0.32
LIN54-201ENST00000340417 ST13P5Q8NFI4 369 aaPredicted RBP13.07□□□□□ -0.32
LIN54-201ENST00000340417 NAT9Q9BTE0 207 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 IRX2Q9BZI1 471 aaPredicted RBP13.07□□□□□ -0.32
LIN54-201ENST00000340417 PRKD2Q9BZL6 878 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 STAU1O95793 577 aaKnown RBP13.07□□□□□ -0.32
LIN54-201ENST00000340417 CTPS1P17812 591 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 UBE3AQ05086 875 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 C11orf63Q6NUN7 778 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 GSPT2Q8IYD1 628 aaKnown RBP13.07□□□□□ -0.32
LIN54-201ENST00000340417 ZNF461Q8TAF7 563 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 TOX2Q96NM4 488 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 GKN1Q9NS71 199 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 ORC6Q9Y5N6 252 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 HPCAP84074 193 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 MAMLD1Q13495 774 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 TRIM55Q9BYV6 548 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 VCX3BQ9H321 246 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 ERVK-5Q9HDB9 667 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 TDP1Q9NUW8 608 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 CA14Q9ULX7 337 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 SLX4Q8IY92 1834 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 A0A0G2JND7 137 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 ATG7O95352 703 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 CHRNA1P02708 482 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 ERBB2P04626 1255 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 LRRC55Q6ZSA7 311 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 SHC3Q92529 594 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 ASB8Q9H765 288 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 ARHGAP20Q9P2F6 1191 aa13.07□□□□□ -0.32
LIN54-201ENST00000340417 MAGEB16A2A368 324 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 CCNB1P14635 433 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 AKT2P31751 481 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 SOAT1P35610 550 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 SERPINH1P50454 418 aaKnown RBP13.06□□□□□ -0.32
LIN54-201ENST00000340417 GIMAP7Q8NHV1 300 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 DNAJB4Q9UDY4 337 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 GGT7Q9UJ14 662 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 UGT2B4P06133 528 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 CES1P23141 567 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 KCNK16Q96T55 309 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 FANCEQ9HB96 536 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 A0A1B0GVM2 712 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 TCAF2A6NFQ2 919 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 H3BQ06 376 aaPredicted RBP13.06□□□□□ -0.32
LIN54-201ENST00000340417 DDX3XO00571 662 aaKnown RBP eCLIP13.06□□□□□ -0.329e-10■■■■□ 22.6
LIN54-201ENST00000340417 MEFVO15553 781 aaPredicted RBP13.06□□□□□ -0.32
LIN54-201ENST00000340417 SNRPAP09012 282 aaKnown RBP13.06□□□□□ -0.32
LIN54-201ENST00000340417 MNAT1P51948 309 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 TRIP4Q15650 581 aaPredicted RBP13.06□□□□□ -0.32
LIN54-201ENST00000340417 LRRC26Q2I0M4 334 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 USP39Q53GS9 565 aaKnown RBP13.06□□□□□ -0.32
LIN54-201ENST00000340417 PPP1R15BQ5SWA1 713 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 MROH9Q5TGP6 573 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 TXNDC8Q6A555 127 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 DQX1Q8TE96 717 aaKnown RBP13.06□□□□□ -0.32
LIN54-201ENST00000340417 PPWD1Q96BP3 646 aaKnown RBP13.06□□□□□ -0.32
LIN54-201ENST00000340417 IL12RB2Q99665 862 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 ABCB6Q9NP58 842 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.06□□□□□ -0.32
LIN54-201ENST00000340417 NID2Q14112 1375 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 DNAJC25-GNG10A0A024R161 153 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 RARAP10276 462 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 ARMCX6Q7L4S7 300 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 SEMA4DQ92854 862 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 SGF29Q96ES7 293 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 NTPCRQ9BSD7 190 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms