RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 HGSNATQ68CP4 663 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 KIAA1324Q6UXG2 1013 aaKnown RBP15.72■□□□□ 0.11
PRKN-201ENST00000338468 METTL3Q86U44 580 aaKnown RBP15.72■□□□□ 0.11
PRKN-201ENST00000338468 TMPRSS6Q8IU80 811 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 SPACA7Q96KW9 195 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 HAPLN3Q96S86 360 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 SMOC1Q9H4F8 434 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 PRDM16Q9HAZ2 1276 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 PRSS16Q9NQE7 514 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 TMEM51Q9NW97 253 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 USP36Q9P275 1121 aaKnown RBP15.72■□□□□ 0.11
PRKN-201ENST00000338468 ZNF212Q9UDV6 495 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 CYP8B1Q9UNU6 501 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 ERVW-1Q9UQF0 538 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 TBC1D30Q9Y2I9 924 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 PAXBP1Q9Y5B6 917 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 PCDHGA5Q9Y5G8 931 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 LAMA1P25391 3075 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 FRYQ5TBA9 3013 aa15.72■□□□□ 0.11
PRKN-201ENST00000338468 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.71■□□□□ 0.11
PRKN-201ENST00000338468 ZNF217O75362 1048 aa15.71■□□□□ 0.11
PRKN-201ENST00000338468 CLDN11O75508 207 aa15.71■□□□□ 0.11
PRKN-201ENST00000338468 MPLP40238 635 aa15.71■□□□□ 0.11
PRKN-201ENST00000338468 PTGER3P43115 390 aa15.71■□□□□ 0.11
PRKN-201ENST00000338468 CDH4P55283 916 aa15.71■□□□□ 0.11
PRKN-201ENST00000338468 RPL7AP62424 266 aaKnown RBP15.71■□□□□ 0.11
PRKN-201ENST00000338468 BYSLQ13895 437 aaKnown RBP15.71■□□□□ 0.11
PRKN-201ENST00000338468 STPG1Q5TH74 334 aa15.71■□□□□ 0.11
PRKN-201ENST00000338468 DNAJC24Q6P3W2 148 aa15.71■□□□□ 0.11
PRKN-201ENST00000338468 LRSAM1Q6UWE0 723 aa15.71■□□□□ 0.11
PRKN-201ENST00000338468 STRADAQ7RTN6 431 aa15.71■□□□□ 0.11
PRKN-201ENST00000338468 CCDC117Q8IWD4 279 aaPredicted RBP15.71■□□□□ 0.11
PRKN-201ENST00000338468 TMEFF1Q8IYR6 380 aa15.71■□□□□ 0.11
PRKN-201ENST00000338468 KDM1BQ8NB78 822 aa15.71■□□□□ 0.11
PRKN-201ENST00000338468 OR2T3Q8NH03 318 aa15.71■□□□□ 0.11
PRKN-201ENST00000338468 NUP58Q9BVL2 599 aa15.71■□□□□ 0.11
PRKN-201ENST00000338468 SELENOOQ9BVL4 669 aa15.71■□□□□ 0.11
PRKN-201ENST00000338468 MAGEB5Q9BZ81 275 aa15.71■□□□□ 0.11
PRKN-201ENST00000338468 XPO4Q9C0E2 1151 aaKnown RBP15.71■□□□□ 0.11
PRKN-201ENST00000338468 ITM2CQ9NQX7 267 aa15.71■□□□□ 0.11
PRKN-201ENST00000338468 MPP6Q9NZW5 540 aa15.71■□□□□ 0.11
PRKN-201ENST00000338468 SLCO3A1Q9UIG8 710 aa15.71■□□□□ 0.11
PRKN-201ENST00000338468 NUP205Q92621 2012 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 ATRXP46100 2492 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 TMCO5BA8MYB1 307 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 TTC34A8MYJ7 566 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 E9PAM4 449 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 TM4SF5O14894 197 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 ZBTB24O43167 697 aaPredicted RBP15.7■□□□□ 0.1
PRKN-201ENST00000338468 GYPCP04921 128 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 GPD1P21695 349 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 ADRA1BP35368 520 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 STK19P49842 368 aaPredicted RBP15.7■□□□□ 0.1
PRKN-201ENST00000338468 ECT2LQ008S8 904 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 OGDHQ02218 1023 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 CREB5Q02930 508 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 KLHL30Q0D2K2 578 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 SLC12A1Q13621 1099 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 ARID5BQ14865 1188 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 MANEALQ5VSG8 457 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 LPCAT2Q7L5N7 544 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 CACUL1Q86Y37 369 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 CCDC185Q8N715 623 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 FAM172AQ8WUF8 416 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 SIPA1Q96FS4 1042 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 VCPIP1Q96JH7 1222 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 MCEEQ96PE7 176 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 FEM1AQ9BSK4 669 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 TSPY26PQ9H489 355 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 RXFP3Q9NSD7 469 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 RALYQ9UKM9 306 aaKnown RBP15.7■□□□□ 0.1
PRKN-201ENST00000338468 CAPN11Q9UMQ6 739 aa15.7■□□□□ 0.1
PRKN-201ENST00000338468 ITIH6Q6UXX5 1313 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 BAHCC1Q9P281 2608 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.69■□□□□ 0.1
PRKN-201ENST00000338468 FAM72CH0Y354 149 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 MAP3K13O43283 966 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 CCP110O43303 1012 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 ATMINO43313 823 aaPredicted RBP15.69■□□□□ 0.1
PRKN-201ENST00000338468 SIN3BO75182 1162 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 MOCS3O95396 460 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 IGLV3-19P01714 112 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 SRPRAP08240 638 aaKnown RBP15.69■□□□□ 0.1
PRKN-201ENST00000338468 GZMAP12544 262 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 DHPSP49366 369 aaPredicted RBP15.69■□□□□ 0.1
PRKN-201ENST00000338468 TPMTP51580 245 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 ZNF143P52747 638 aaPredicted RBP15.69■□□□□ 0.1
PRKN-201ENST00000338468 RPS14P62263 151 aaKnown RBP15.69■□□□□ 0.1
PRKN-201ENST00000338468 ZBED6P86452 979 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 NRG1Q02297 640 aaPredicted RBP15.69■□□□□ 0.1
PRKN-201ENST00000338468 RPL6Q02878 288 aaKnown RBP15.69■□□□□ 0.1
PRKN-201ENST00000338468 ZNF177Q13360 481 aaPredicted RBP15.69■□□□□ 0.1
PRKN-201ENST00000338468 MAMLD1Q13495 774 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 HNRNPA1L2Q32P51 320 aaKnown RBP15.69■□□□□ 0.1
PRKN-201ENST00000338468 SPDYCQ5MJ68 293 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 C9orf64Q5T6V5 341 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 ACBD5Q5T8D3 534 aaPredicted RBP15.69■□□□□ 0.1
PRKN-201ENST00000338468 FAM72AQ5TYM5 149 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 TCEAL6Q6IPX3 200 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 PLEKHA7Q6IQ23 1121 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms