RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 ITGB6P18564 788 aa6.62□□□□□ -1.35
HMG20A-201ENST00000336216 ZNF143P52747 638 aaPredicted RBP6.62□□□□□ -1.35
HMG20A-201ENST00000336216 GDF10P55107 478 aa6.62□□□□□ -1.35
HMG20A-201ENST00000336216 PKNOX1P55347 436 aa6.62□□□□□ -1.35
HMG20A-201ENST00000336216 MRPS22P82650 360 aaKnown RBP6.62□□□□□ -1.35
HMG20A-201ENST00000336216 VEPH1Q14D04 833 aa6.62□□□□□ -1.35
HMG20A-201ENST00000336216 CYP1B1Q16678 543 aa6.62□□□□□ -1.35
HMG20A-201ENST00000336216 CCDC142Q17RM4 750 aa6.62□□□□□ -1.35
HMG20A-201ENST00000336216 SLC5A9Q2M3M2 681 aa6.62□□□□□ -1.35
HMG20A-201ENST00000336216 C6orf10Q5SRN2 563 aa6.62□□□□□ -1.35
HMG20A-201ENST00000336216 RBM44Q6ZP01 1051 aaKnown RBP6.62□□□□□ -1.35
HMG20A-201ENST00000336216 PHF13Q86YI8 300 aaPredicted RBP6.62□□□□□ -1.35
HMG20A-201ENST00000336216 PHC3Q8NDX5 983 aa6.62□□□□□ -1.35
HMG20A-201ENST00000336216 PPHLN1Q8NEY8 458 aaKnown RBP6.62□□□□□ -1.35
HMG20A-201ENST00000336216 NRG4Q8WWG1 115 aa6.62□□□□□ -1.35
HMG20A-201ENST00000336216 MRPL1Q9BYD6 325 aaKnown RBP6.62□□□□□ -1.35
HMG20A-201ENST00000336216 FOXP3Q9BZS1 431 aa6.62□□□□□ -1.35
HMG20A-201ENST00000336216 XAB2Q9HCS7 855 aaKnown RBP6.62□□□□□ -1.35
HMG20A-201ENST00000336216 DMAP1Q9NPF5 467 aaPredicted RBP6.62□□□□□ -1.35
HMG20A-201ENST00000336216 TMPRSS4Q9NRS4 437 aa6.62□□□□□ -1.35
HMG20A-201ENST00000336216 LGALS13Q9UHV8 139 aa6.62□□□□□ -1.35
HMG20A-201ENST00000336216 SOX13Q9UN79 622 aa6.62□□□□□ -1.35
HMG20A-201ENST00000336216 PLA2G4CQ9UP65 541 aa6.62□□□□□ -1.35
HMG20A-201ENST00000336216 AURKCQ9UQB9 309 aa6.62□□□□□ -1.35
HMG20A-201ENST00000336216 RUVBL2Q9Y230 463 aaKnown RBP6.62□□□□□ -1.35
HMG20A-201ENST00000336216 CRYL1Q9Y2S2 319 aa6.62□□□□□ -1.35
HMG20A-201ENST00000336216 LRRC37AA6NMS7 1700 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 MYOCOSA0A1B0GUC4 107 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 TCRBV7S3A2A0A539 114 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 GLTPD2A6NH11 291 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 GNGT2O14610 69 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 TM9SF1O15321 606 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 NDUFS3O75489 264 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 VAV1P15498 845 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 ERCC2P18074 760 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 PEX2P28328 305 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 CCR1P32246 355 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 PTPN7P35236 360 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 MAPK10P53779 464 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 SIX1Q15475 284 aaPredicted RBP6.61□□□□□ -1.35
HMG20A-201ENST00000336216 DUSP28Q4G0W2 176 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 ZRANB3Q5FWF4 1079 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 ACBD5Q5T8D3 534 aaPredicted RBP6.61□□□□□ -1.35
HMG20A-201ENST00000336216 N4BP2L1Q5TBK1 243 aaPredicted RBP6.61□□□□□ -1.35
HMG20A-201ENST00000336216 RNF219Q5W0B1 726 aaPredicted RBP6.61□□□□□ -1.35
HMG20A-201ENST00000336216 HOMEZQ8IX15 550 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 C12orf56Q8IXR9 622 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 ATAD1Q8NBU5 361 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 MTMR14Q8NCE2 650 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 ZSCAN18Q8TBC5 510 aaPredicted RBP6.61□□□□□ -1.35
HMG20A-201ENST00000336216 EME1Q96AY2 570 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 ULK4Q96C45 1275 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 TMEM169Q96HH4 297 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 TRAPPC9Q96Q05 1148 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 OMDQ99983 421 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 EBF4Q9BQW3 602 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 APOL5Q9BWW9 433 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 PDZD7Q9H5P4 517 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 PIF1Q9H611 641 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 CDHR5Q9HBB8 845 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 COL11A2P13942 1736 aaPredicted RBP6.61□□□□□ -1.35
HMG20A-201ENST00000336216 TBKBP1A7MCY6 615 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 ERI2A8K979 691 aaKnown RBP6.61□□□□□ -1.35
HMG20A-201ENST00000336216 ALOX15BO15296 676 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 ALDH2P05091 517 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 CDC16Q13042 620 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 MAP2K5Q13163 448 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 PDAP1Q13442 181 aaKnown RBP6.61□□□□□ -1.35
HMG20A-201ENST00000336216 MOGSQ13724 837 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 SNX17Q15036 470 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 NRF1Q16656 503 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 MSS51Q4VC12 460 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 ZNF618Q5T7W0 954 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 VWA5B1Q5TIE3 1220 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 ILDR2Q71H61 639 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 MON1BQ7L1V2 547 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 SZRD1Q7Z422 152 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 HPS6Q86YV9 775 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 ALLCQ8N6M5 410 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 SLC4A11Q8NBS3 891 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 APOPT1Q96IL0 206 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 SERAC1Q96JX3 654 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 PHACTR1Q9C0D0 580 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 NRDE2Q9H7Z3 1164 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 OLA1Q9NTK5 396 aaKnown RBP6.61□□□□□ -1.35
HMG20A-201ENST00000336216 EPS15L1Q9UBC2 864 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 SLC7A8Q9UHI5 535 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 IPPQ9Y573 584 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 TCRBV9S1A1TA0A576 114 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 MYBPHLA2RUH7 354 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 PRR23AA6NEV1 266 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 CCL22O00626 93 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 SPATA31D3P0C874 917 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 PRKAR2AP13861 404 aaKnown RBP6.61□□□□□ -1.35
HMG20A-201ENST00000336216 FGFR3P22607 806 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 EEF1B2P24534 225 aaKnown RBP6.61□□□□□ -1.35
HMG20A-201ENST00000336216 IVDP26440 423 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 OR1E1P30953 314 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 AQP4P55087 323 aa6.61□□□□□ -1.35
HMG20A-201ENST00000336216 TBL3Q12788 808 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms