RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 SMIM35A0A1B0GVV1 85 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 TRIM13O60858 407 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 BAIAP3O94812 1187 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 TPBGLP0DKB5 382 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 ERCC2P18074 760 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 SP100P23497 879 aaPredicted RBP13.26□□□□□ -0.29
VSTM4-202ENST00000332853 DENND1CQ8IV53 801 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 UBA2Q9UBT2 640 aaPredicted RBP13.26□□□□□ -0.29
VSTM4-202ENST00000332853 HSPA1AP0DMV8 641 aaKnown RBP13.26□□□□□ -0.29
VSTM4-202ENST00000332853 HSPA1BP0DMV9 641 aaKnown RBP13.26□□□□□ -0.29
VSTM4-202ENST00000332853 NFYCQ13952 458 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 NDNQ99608 321 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 LHX5Q9H2C1 402 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 FAM50BQ9Y247 325 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 NR2E1Q9Y466 385 aa13.26□□□□□ -0.29
VSTM4-202ENST00000332853 DDHD2O94830 711 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 DRG2P55039 364 aaKnown RBP13.25□□□□□ -0.29
VSTM4-202ENST00000332853 C16orf87Q6PH81 154 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 CACUL1Q86Y37 369 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 NOCTQ9UK39 431 aaKnown RBP13.25□□□□□ -0.29
VSTM4-202ENST00000332853 GLTPD2A6NH11 291 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 MSI1O43347 362 aaKnown RBP13.25□□□□□ -0.29
VSTM4-202ENST00000332853 ATP6V1B1P15313 513 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 TMEM192Q8IY95 271 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 MAML3Q96JK9 1138 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 MID1IP1Q9NPA3 183 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 hCG_2014768A0A024R1R8 64 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 PIRTP0C851 137 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 ALADP13716 330 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 SERPINH1P50454 418 aaKnown RBP13.25□□□□□ -0.29
VSTM4-202ENST00000332853 MTFR1Q15390 333 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 LRRC52Q8N7C0 313 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 YIPF2Q9BWQ6 316 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 ST6GALNAC4Q9H4F1 302 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 SNX13Q9Y5W8 968 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 COL1A2P08123 1366 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 UBDO15205 165 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 PDE5AO76074 875 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 PMF1Q6P1K2 205 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 ANKRD23Q86SG2 305 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 ZNF516Q92618 1163 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 MRPL9Q9BYD2 267 aaKnown RBP13.25□□□□□ -0.29
VSTM4-202ENST00000332853 BPIFA1Q9NP55 256 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 DTNAQ9Y4J8 743 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 DCXO43602 365 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 FAM110CQ1W6H9 321 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 FAM182AQ5T1J6 154 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 CACHD1Q5VU97 1274 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 RRM2BQ7LG56 351 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 SLC4A11Q8NBS3 891 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 APBB2Q92870 758 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 BTBD10Q9BSF8 475 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 MECRQ9BV79 373 aa13.25□□□□□ -0.29
VSTM4-202ENST00000332853 ADAMTSL3P82987 1691 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 VNN1O95497 513 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 PCNAP12004 261 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 CRABP2P29373 138 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 INHBEP58166 350 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 FNBP1LQ5T0N5 605 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 CERS2Q96G23 380 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 CCDC134Q9H6E4 229 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 DAB1O75553 588 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 FAM155BO75949 473 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 NUDT17P0C025 328 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 ATP5C1P36542 298 aaKnown RBP13.24□□□□□ -0.29
VSTM4-202ENST00000332853 CCNG1P51959 295 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 C11orf74Q86VG3 221 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 HORMAD1Q86X24 394 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 SLC22A9Q8IVM8 553 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 EXOC2Q96KP1 924 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 PPP1R10Q96QC0 940 aaKnown RBP13.24□□□□□ -0.29
VSTM4-202ENST00000332853 POLR1EQ9GZS1 481 aaKnown RBP13.24□□□□□ -0.29
VSTM4-202ENST00000332853 ZNF112Q9UJU3 913 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 LRCH4O75427 683 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 ZCCHC18P0CG32 403 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 CDK16Q00536 496 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 UROC1Q96N76 676 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 ZNF536O15090 1300 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 STAU1O95793 577 aaKnown RBP13.24□□□□□ -0.29
VSTM4-202ENST00000332853 FASTKD3Q14CZ7 662 aaKnown RBP13.24□□□□□ -0.29
VSTM4-202ENST00000332853 ZNF284Q2VY69 593 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 SDE2Q6IQ49 451 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 CHADLQ6NUI6 762 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 TOP6BLQ8N6T0 577 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 IL22Q9GZX6 179 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 TMEM161AQ9NX61 479 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 SCHIP1Q9P0W5 487 aaPredicted RBP13.24□□□□□ -0.29
VSTM4-202ENST00000332853 RBPJLQ9UBG7 517 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 ZMYM5Q9UJ78 669 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 BTN3A1O00481 513 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 TBC1D4O60343 1298 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 CLCNKBP51801 687 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 LCLAT1Q6UWP7 414 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 ANKS3Q6ZW76 656 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 FBXO39Q8N4B4 442 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 KCTD15Q96SI1 283 aaPredicted RBP13.24□□□□□ -0.29
VSTM4-202ENST00000332853 VAT1Q99536 393 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 PRKD2Q9BZL6 878 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 LRRC4CQ9HCJ2 640 aa13.24□□□□□ -0.29
VSTM4-202ENST00000332853 SLCO1B3Q9NPD5 702 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms