RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 MAPK10P53779 464 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 XIAPP98170 497 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 CEACAM7Q14002 265 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 FAM219BQ5XKK7 198 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 EEF1DP3Q658K8 133 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 SLC9A4Q6AI14 798 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 KLHL35Q6PF15 583 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 POTEAQ6S8J7 498 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 SIX5Q8N196 739 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 PYROXD2Q8N2H3 581 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 SPATA6LQ8N4H0 392 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 TRAPPC12Q8WVT3 735 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 WRNIP1Q96S55 665 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 AGAP2Q99490 1192 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 MRIQ9BWK5 157 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 XYLT2Q9H1B5 865 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 SYBUQ9NX95 663 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 SNX13Q9Y5W8 968 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 RECKO95980 971 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 SDC4P31431 198 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 CYP4V2Q6ZWL3 525 aaPredicted RBP8.06□□□□□ -1.12
VMA21-201ENST00000330374 DCLK2Q8N568 766 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 CCNYL1Q8N7R7 359 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 C7orf31Q8N865 590 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 TSPAN14Q8NG11 270 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 NSUN6Q8TEA1 469 aaKnown RBP8.06□□□□□ -1.12
VMA21-201ENST00000330374 DIS3LQ8TF46 1054 aaKnown RBP8.06□□□□□ -1.12
VMA21-201ENST00000330374 MRPL4Q9BYD3 311 aaKnown RBP8.06□□□□□ -1.12
VMA21-201ENST00000330374 SNX15Q9NRS6 342 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 DNAJC28Q9NX36 388 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 C6orf203Q9P0P8 240 aaPredicted RBP8.06□□□□□ -1.12
VMA21-201ENST00000330374 STK39Q9UEW8 545 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 DCDC2Q9UHG0 476 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 ADGRA2Q96PE1 1338 aa8.06□□□□□ -1.12
VMA21-201ENST00000330374 TMEM88BA6NKF7 163 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 RNASEH2AO75792 299 aaKnown RBP8.05□□□□□ -1.12
VMA21-201ENST00000330374 MT-CO1P00395 513 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 IMPDH2P12268 514 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 RALGDSQ12967 914 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 LPIN1Q14693 890 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 CCDC14Q49A88 953 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 C6orf132Q5T0Z8 1188 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 IL23RQ5VWK5 629 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 ZNF410Q86VK4 478 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 RIN3Q8TB24 985 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 FNIP1Q8TF40 1166 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 HLA-CQ95604 372 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 SGF29Q96ES7 293 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 ZFRQ96KR1 1074 aaKnown RBP8.05□□□□□ -1.12
VMA21-201ENST00000330374 KLHL32Q96NJ5 620 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 TMEM79Q9BSE2 394 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 CDH19Q9H159 772 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 WDR41Q9HAD4 459 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 ARHGEF37A1IGU5 675 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 C2CD4BA6NLJ0 364 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 TMX2-CTNND1H3BSU7 103 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 ZNF195O14628 629 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 CASQ2O14958 399 aaPredicted RBP8.05□□□□□ -1.12
VMA21-201ENST00000330374 WDR46O15213 610 aaKnown RBP8.05□□□□□ -1.12
VMA21-201ENST00000330374 OGTO15294 1046 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 GRK2P25098 689 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 CDH5P33151 784 aaPredicted RBP8.05□□□□□ -1.12
VMA21-201ENST00000330374 LSM12Q3MHD2 195 aaKnown RBP8.05□□□□□ -1.12
VMA21-201ENST00000330374 MAP1SQ66K74 1059 aaPredicted RBP8.05□□□□□ -1.12
VMA21-201ENST00000330374 PPP2R2DQ66LE6 453 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 STRA8Q7Z7C7 330 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 COLGALT1Q8NBJ5 622 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 ZDHHC16Q969W1 377 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 ZNF669Q96BR6 464 aaPredicted RBP8.05□□□□□ -1.12
VMA21-201ENST00000330374 GPRASP2Q96D09 838 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 TMEM176AQ96HP8 235 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 RTKNQ9BST9 563 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 TSPAN16Q9UKR8 245 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 CDY2AQ9Y6F7 541 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 CDY1Q9Y6F8 540 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 TRIP11Q15643 1979 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 ANKRD12Q6UB98 2062 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 CNTNAP1P78357 1384 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.05□□□□□ -1.12
VMA21-201ENST00000330374 PDLIM1O00151 329 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 PAPSS1O43252 624 aaPredicted RBP8.05□□□□□ -1.12
VMA21-201ENST00000330374 DENRO43583 198 aaKnown RBP8.05□□□□□ -1.12
VMA21-201ENST00000330374 PRKCGP05129 697 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 JUNP05412 331 aaKnown RBP8.05□□□□□ -1.12
VMA21-201ENST00000330374 PDGFRBP09619 1106 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 HOXC6P09630 235 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 FBXO45P0C2W1 286 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 THRAP10827 490 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 DPP6P42658 865 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 ENTPD1P49961 510 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 MCCD1P59942 119 aaPredicted RBP8.05□□□□□ -1.12
VMA21-201ENST00000330374 NPAS4Q8IUM7 802 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 CDKL3Q8IVW4 592 aaPredicted RBP8.05□□□□□ -1.12
VMA21-201ENST00000330374 LRTOMTQ8WZ04 291 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 MS4A3Q96HJ5 214 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 CIB1Q99828 191 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 FERMT1Q9BQL6 677 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 COQ10BQ9H8M1 238 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 TMPRSS4Q9NRS4 437 aa8.05□□□□□ -1.12
VMA21-201ENST00000330374 TMEM233B4DJY2 109 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms