RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 FRG1Q14331 258 aaKnown RBP14.9□□□□□ -0.02
TPM3-206ENST00000330188 PCLAFQ15004 111 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 INSCQ1MX18 579 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 PAN2Q504Q3 1202 aaKnown RBP14.9□□□□□ -0.02
TPM3-206ENST00000330188 RFWD3Q6PCD5 774 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 C4orf50Q6ZRC1 276 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 DNAAF3Q8N9W5 541 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.9□□□□□ -0.02
TPM3-206ENST00000330188 TTC8Q8TAM2 541 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 SH3TC2Q8TF17 1288 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 ATP2A3Q93084 1043 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 ISL2Q96A47 359 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 ZNF778Q96MU6 729 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 PKMYT1Q99640 499 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 RBBP8Q99708 897 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 TMLHEQ9NVH6 421 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 TAS2R1Q9NYW7 299 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 TXNDC16Q9P2K2 825 aa14.9□□□□□ -0.02
TPM3-206ENST00000330188 PPARGC1AQ9UBK2 798 aaKnown RBP14.9□□□□□ -0.02
TPM3-206ENST00000330188 ITM2AO43736 263 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 ZNF623O75123 536 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 POMCP01189 267 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 PROCP04070 461 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 CYP11A1P05108 521 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 GNAZP19086 355 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 CD52P31358 61 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 MAGEA12P43365 314 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 CCNG1P51959 295 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 ANKRD20A4Q4UJ75 823 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 PPM1JQ5JR12 505 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 TEDDM1Q5T9Z0 273 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 ITPRIPL1Q6GPH6 555 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 RPAINQ86UA6 219 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 TREML1Q86YW5 311 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 SCML4Q8N228 414 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 ENDOVQ8N8Q3 282 aaKnown RBP14.89□□□□□ -0.03
TPM3-206ENST00000330188 SMC1BQ8NDV3 1235 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 PPP1R14CQ8TAE6 165 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 ZSCAN18Q8TBC5 510 aaPredicted RBP14.89□□□□□ -0.03
TPM3-206ENST00000330188 DQX1Q8TE96 717 aaKnown RBP14.89□□□□□ -0.03
TPM3-206ENST00000330188 TMEM209Q96SK2 561 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 UPF3AQ9H1J1 476 aaKnown RBP14.89□□□□□ -0.03
TPM3-206ENST00000330188 SNX15Q9NRS6 342 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 ADAM28Q9UKQ2 775 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 PADI3Q9ULW8 664 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 LYPLA1O75608 230 aaPredicted RBP14.89□□□□□ -0.03
TPM3-206ENST00000330188 B3GAT3O94766 335 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 ATP5BP06576 529 aaKnown RBP14.89□□□□□ -0.03
TPM3-206ENST00000330188 RPSAP08865 295 aaKnown RBP14.89□□□□□ -0.03
TPM3-206ENST00000330188 TPBGLP0DKB5 382 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 TYK2P29597 1187 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 GMPRP36959 345 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 CERCAMQ5T4B2 595 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 DCLRE1AQ6PJP8 1040 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 METTL23Q86XA0 190 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 DCLK2Q8N568 766 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 CELF6Q96J87 481 aaKnown RBP14.89□□□□□ -0.03
TPM3-206ENST00000330188 TEKT5Q96M29 485 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 VAT1Q99536 393 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 DMAP1Q9NPF5 467 aaPredicted RBP14.89□□□□□ -0.03
TPM3-206ENST00000330188 TMEM216Q9P0N5 145 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 NEU3Q9UQ49 428 aa14.89□□□□□ -0.03
TPM3-206ENST00000330188 ARHGAP42A6NI28 874 aa14.88□□□□□ -0.03
TPM3-206ENST00000330188 ENTPD5O75356 428 aa14.88□□□□□ -0.03
TPM3-206ENST00000330188 IGLV3-25P01717 112 aa14.88□□□□□ -0.03
TPM3-206ENST00000330188 SPRP35270 261 aaPredicted RBP14.88□□□□□ -0.03
TPM3-206ENST00000330188 SLC1A6P48664 564 aa14.88□□□□□ -0.03
TPM3-206ENST00000330188 LIMK2P53671 638 aa14.88□□□□□ -0.03
TPM3-206ENST00000330188 CMC1Q7Z7K0 106 aa14.88□□□□□ -0.03
TPM3-206ENST00000330188 LRRTM3Q86VH5 581 aa14.88□□□□□ -0.03
TPM3-206ENST00000330188 OR10T2Q8NGX3 314 aa14.88□□□□□ -0.03
TPM3-206ENST00000330188 GIMAP7Q8NHV1 300 aa14.88□□□□□ -0.03
TPM3-206ENST00000330188 HASPINQ8TF76 798 aa14.88□□□□□ -0.03
TPM3-206ENST00000330188 AZIN2Q96A70 460 aa14.88□□□□□ -0.03
TPM3-206ENST00000330188 MFSD3Q96ES6 412 aa14.88□□□□□ -0.03
TPM3-206ENST00000330188 NUDCD1Q96RS6 583 aa14.88□□□□□ -0.03
TPM3-206ENST00000330188 AGAP2Q99490 1192 aa14.88□□□□□ -0.03
TPM3-206ENST00000330188 EBF4Q9BQW3 602 aa14.88□□□□□ -0.03
TPM3-206ENST00000330188 OSBPL2Q9H1P3 480 aa14.88□□□□□ -0.03
TPM3-206ENST00000330188 ZFYVE28Q9HCC9 887 aa14.88□□□□□ -0.03
TPM3-206ENST00000330188 M0QZQ0 153 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 ATP9BO43861 1147 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 JCHAINP01591 159 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 SERPINE1P05121 402 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 F7P08709 466 aaPredicted RBP14.87□□□□□ -0.03
TPM3-206ENST00000330188 THPOP40225 353 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 NPY2RP49146 381 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 RAB27AP51159 221 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 EIF4EBP2Q13542 120 aaPredicted RBP14.87□□□□□ -0.03
TPM3-206ENST00000330188 DSC3Q14574 896 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 ATG14Q6ZNE5 492 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 STRA8Q7Z7C7 330 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 C10orf107Q8IVU9 208 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 PIWIL2Q8TC59 973 aaKnown RBP14.87□□□□□ -0.03
TPM3-206ENST00000330188 KCNV2Q8TDN2 545 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 RNF34Q969K3 372 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 APOL2Q9BQE5 337 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 CCDC106Q9BWC9 280 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 ZNF358Q9NW07 568 aa14.87□□□□□ -0.03
TPM3-206ENST00000330188 COPG2Q9UBF2 871 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms