RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 NAA20P61599 178 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 SIX5Q8N196 739 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 CTSHP09668 335 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 RPL5P46777 297 aaKnown RBP17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 ARF5P84085 180 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 BAATQ14032 418 aaPredicted RBP17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 STARD3Q14849 445 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 ZDHHC17Q8IUH5 632 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 RAET1EQ8TD07 263 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 CELF1Q92879 486 aaKnown RBP17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 TARS2Q9BW92 718 aaKnown RBP17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 C3orf18Q9UK00 162 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 ARHGDIBP52566 201 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 TAF13Q15543 124 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 ZHX1-C8orf76Q96EF9 292 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 DCLK3Q9C098 648 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 POMKQ9H5K3 350 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 OSGEPQ9NPF4 335 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 GDF3Q9NR23 364 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 INTS11Q5TA45 600 aaKnown RBP17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 CYP20A1Q6UW02 462 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 FKBP14Q9NWM8 211 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 SQLEQ14534 574 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 ACTL9Q8TC94 416 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 HAVCR1Q96D42 359 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 COX4I2Q96KJ9 171 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 MTG1Q9BT17 334 aaPredicted RBP17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 VPS28Q9UK41 221 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 ROBO2Q9HCK4 1378 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 PLOD3O60568 738 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 TRAP1Q12931 704 aaKnown RBP17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 BMPR2Q13873 1038 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 PTCD3Q96EY7 689 aaKnown RBP17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 PGM2Q96G03 612 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 ZCCHC2Q9C0B9 1178 aaKnown RBP17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 PRG2P13727 222 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 AAASQ9NRG9 546 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 AK5Q9Y6K8 562 aa17.16■□□□□ 0.34
SMCHD1-201ENST00000320876 SAGE2PA6NJ88 616 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 ITGA2P17301 1181 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 HOXB6P17509 224 aaKnown RBP17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 S100A1P23297 94 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 NEK5Q6P3R8 708 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 CXXC5Q7LFL8 322 aaKnown RBP17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 VCPIP1Q96JH7 1222 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 OGTO15294 1046 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 HIRAP54198 1017 aaPredicted RBP17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 IL27RAQ6UWB1 636 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 USP49Q70CQ1 688 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 KBTBD2Q8IY47 623 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 POC5Q8NA72 575 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 BBS4Q96RK4 519 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 LYVE1Q9Y5Y7 322 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 CYP1A1P04798 512 aaPredicted RBP17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 ACOT1Q86TX2 421 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 CARNMT1Q8N4J0 409 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 DGCR14Q96DF8 476 aaKnown RBP17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 CLK4Q9HAZ1 481 aaKnown RBP17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 IKZF3Q9UKT9 509 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 CAMTA2O94983 1202 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 C6orf222P0C671 652 aaPredicted RBP17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 LPIN1Q14693 890 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 ZNF549Q6P9A3 640 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 ZNF621Q6ZSS3 439 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 RASSF6Q6ZTQ3 369 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 WDR49Q8IV35 697 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 TMEM159Q96B96 161 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 PPP1R14BQ96C90 147 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 JMJD4Q9H9V9 463 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 NEXMIFQ5QGS0 1516 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 HACD1B0YJ81 288 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 RRM1P23921 792 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 ACAT1P24752 427 aaKnown RBP17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 IL12AP29459 219 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 CGRRF1Q99675 332 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 UNC5CO95185 931 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 LHX1P48742 406 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 SMCO1Q147U7 214 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 MFSD7Q6UXD7 560 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 TMCC2O75069 709 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 CYP7B1O75881 506 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 RPL21P46778 160 aaKnown RBP17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 BST2Q10589 180 aaKnown RBP17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 OLFML2AQ68BL7 652 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 ATG9AQ7Z3C6 839 aa17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 MTIF3Q9H2K0 278 aaKnown RBP17.15■□□□□ 0.34
SMCHD1-201ENST00000320876 CCDC189A1A4V9 331 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 FGFR2P21802 821 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 GRIA3P42263 894 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 TRHDEQ9UKU6 1024 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 A0A096LPK6 155 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 SERPINF2P08697 491 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 MAPK10P53779 464 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 RNF43Q68DV7 783 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 ZNF470Q6ECI4 717 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 TBL1YQ9BQ87 522 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 TNPO3Q9Y5L0 923 aaKnown RBP17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 MYO9BQ13459 2157 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 A0A0X1KG70 313 aa17.14■□□□□ 0.33
SMCHD1-201ENST00000320876 KPNA6O60684 536 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms