RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 GDAQ9Y2T3 454 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 RABGAP1Q9Y3P9 1069 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 ANKRD26Q9UPS8 1709 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 CEP170BQ9Y4F5 1589 aaPredicted RBP4.42□□□□□ -1.7
SMCO3-201ENST00000316048 NKTRP30414 1462 aaKnown RBP4.42□□□□□ -1.7
SMCO3-201ENST00000316048 TTC21BQ7Z4L5 1316 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 RIMS1Q86UR5 1692 aaKnown RBP4.42□□□□□ -1.7
SMCO3-201ENST00000316048 SEPT4O43236 478 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 DDX58O95786 925 aaKnown RBP4.42□□□□□ -1.7
SMCO3-201ENST00000316048 F9P00740 461 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 ELFN1P0C7U0 828 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 EGR2P11161 476 aaPredicted RBP4.42□□□□□ -1.7
SMCO3-201ENST00000316048 CD72P21854 359 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 AVPR2P30518 371 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 CYP2C18P33260 490 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 PSMC2P35998 433 aaKnown RBP4.42□□□□□ -1.7
SMCO3-201ENST00000316048 SUMO2P61956 95 aaKnown RBP4.42□□□□□ -1.7
SMCO3-201ENST00000316048 GPC5P78333 572 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 TIGD2Q4W5G0 525 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 RNASE12Q5GAN4 147 aaKnown RBP4.42□□□□□ -1.7
SMCO3-201ENST00000316048 SLC22A25Q6T423 547 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 KIRREL2Q6UWL6 708 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 KYAT3Q6YP21 454 aaKnown RBP4.42□□□□□ -1.7
SMCO3-201ENST00000316048 NEK10Q6ZWH5 1172 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 NGDNQ8NEJ9 315 aaKnown RBP4.42□□□□□ -1.7
SMCO3-201ENST00000316048 MAFAQ8NHW3 353 aaPredicted RBP4.42□□□□□ -1.7
SMCO3-201ENST00000316048 RUFY2Q8WXA3 655 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 RNFT2Q96EX2 444 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 PBKQ96KB5 322 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 MACROD1Q9BQ69 325 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 EHD3Q9NZN3 535 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 ADGRB2O60241 1585 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 CDC42BPGQ6DT37 1551 aa4.42□□□□□ -1.7
SMCO3-201ENST00000316048 KIF20BQ96Q89 1820 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 PTCH1Q13635 1447 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 PTPRUQ92729 1446 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 SHPRHQ149N8 1683 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 TTC21AQ8NDW8 1320 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 FAM90A7PA6NKC0 464 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 FAM90A22PA8MWA6 464 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 FAM90A12PA8MX19 464 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 FAM90A23PA8MXZ1 464 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 TIMM44O43615 452 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 DOK2O60496 412 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 CYP3A4P08684 503 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 WEE2P0C1S8 567 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 ZNF37AP17032 561 aaPredicted RBP4.41□□□□□ -1.7
SMCO3-201ENST00000316048 TMPOP42166 694 aaKnown RBP4.41□□□□□ -1.7
SMCO3-201ENST00000316048 RIPK4P57078 832 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 TXNL4AP83876 142 aaKnown RBP4.41□□□□□ -1.7
SMCO3-201ENST00000316048 CDSNQ15517 529 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 TBCEQ15813 527 aaPredicted RBP4.41□□□□□ -1.7
SMCO3-201ENST00000316048 SH2D4BQ5SQS7 431 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 LIPMQ5VYY2 423 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 ARMC6Q6NXE6 501 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 B4GALNT4Q76KP1 1039 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 LRRC8DQ7L1W4 858 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 FASTKD5Q7L8L6 764 aaKnown RBP4.41□□□□□ -1.7
SMCO3-201ENST00000316048 ARHGEF19Q8IW93 802 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 SIRT6Q8N6T7 355 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 PNPLA1Q8N8W4 532 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 CCDC89Q8N998 374 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 EXOC6Q8TAG9 804 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 MASTLQ96GX5 879 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 PGBD1Q96JS3 809 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 PLEKHG4BQ96PX9 1271 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 PLEKHF1Q96S99 279 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 FUZQ9BT04 418 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 ALG8Q9BVK2 526 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 WDR11Q9BZH6 1224 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 DUSP22Q9NRW4 184 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 KRT84Q9NSB2 600 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 ABHD10Q9NUJ1 306 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 PARPBPQ9NWS1 579 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 DLL3Q9NYJ7 618 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 CLIC5Q9NZA1 410 aa4.41□□□□□ -1.7
SMCO3-201ENST00000316048 NPIPB13A6NJU9 1138 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 NPIPB5A8MRT5 1133 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 NPIPB4C9JG80 1138 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 H0YIZ8 118 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 TNPO2O14787 897 aaKnown RBP4.4□□□□□ -1.7
SMCO3-201ENST00000316048 TGM1P22735 817 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 HARS2P49590 506 aaKnown RBP4.4□□□□□ -1.7
SMCO3-201ENST00000316048 AGTR2P50052 363 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 SHC2P98077 582 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 B4GALNT1Q00973 533 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 TLE3Q04726 772 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 CALD1Q05682 793 aaKnown RBP4.4□□□□□ -1.7
SMCO3-201ENST00000316048 CCDC15Q0P6D6 951 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 THOC5Q13769 683 aaKnown RBP4.4□□□□□ -1.7
SMCO3-201ENST00000316048 CBFBQ13951 182 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 BAK1Q16611 211 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 PRICKLE4Q2TBC4 344 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 TEDDM1Q5T9Z0 273 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 RAB11FIP4Q86YS3 637 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 ARMC8Q8IUR7 673 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 CNTROBQ8N137 903 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 BEND2Q8NDZ0 799 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 CHST13Q8NET6 341 aa4.4□□□□□ -1.7
SMCO3-201ENST00000316048 GLMPQ8WWB7 406 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms