RNA–Protein interactions for RNA: ENST00000310169.2

CHRNA9-201, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA9, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-201ENST00000310169 SH3GL3Q99963 347 aa10.13□□□□□ -0.79
CHRNA9-201ENST00000310169 C8orf33Q9H7E9 229 aaPredicted RBP10.13□□□□□ -0.79
CHRNA9-201ENST00000310169 ECT2Q9H8V3 914 aa10.13□□□□□ -0.79
CHRNA9-201ENST00000310169 SMARCAL1Q9NZC9 954 aa10.13□□□□□ -0.79
CHRNA9-201ENST00000310169 CNOT8Q9UFF9 292 aaKnown RBP10.13□□□□□ -0.79
CHRNA9-201ENST00000310169 MRPS17Q9Y2R5 130 aaKnown RBP10.13□□□□□ -0.79
CHRNA9-201ENST00000310169 HBS1LQ9Y450 684 aaKnown RBP10.13□□□□□ -0.79
CHRNA9-201ENST00000310169 ZSCAN5CA6NGD5 496 aaPredicted RBP10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 MIF4GDA9UHW6 222 aaKnown RBP10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 MSI1O43347 362 aaKnown RBP10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 CEP104O60308 925 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 GPR37L1O60883 481 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 FYNP06241 537 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 H2AFZP0C0S5 128 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 GLULP15104 373 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 NQO1P15559 274 aaKnown RBP10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 MMP8P22894 467 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 CORO1AP31146 461 aaKnown RBP10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 SOX9P48436 509 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 CENPCQ03188 943 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 UBXN2BQ14CS0 331 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 DENND2CQ68D51 928 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 H2AFVQ71UI9 128 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 BEND5Q7L4P6 421 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 SLC26A9Q7LBE3 791 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 ZNF571Q7Z3V5 609 aaPredicted RBP10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 PHLDB2Q86SQ0 1253 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 XYLT1Q86Y38 959 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 DENND1CQ8IV53 801 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 DEFB106AQ8N104 65 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 ADAM32Q8TC27 787 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 FAM3CQ92520 227 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 RNF34Q969K3 372 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 PLD4Q96BZ4 506 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 SERPINB11Q96P15 392 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 RABEP2Q9H5N1 569 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 TBC1D17Q9HA65 648 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 HPS4Q9NQG7 708 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 SPATS2LQ9NUQ6 558 aaKnown RBP10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 ASNSD1Q9NWL6 643 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 ZNF510Q9Y2H8 683 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 SYNJ2BP-COX16A0A087WUM0 186 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 OTOL1A6NHN0 477 aaPredicted RBP10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 PRR33A8MZF0 331 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 SPECC1L-ADORA2AF8WAN1 911 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 ADH1CP00326 375 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 PDGFBP01127 241 aaPredicted RBP10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 CALB1P05937 261 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 TBX4P57082 545 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 STARD6P59095 220 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 DHX9Q08211 1270 aaKnown RBP10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 PPP1R7Q15435 360 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 ACAD10Q6JQN1 1059 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 HIBCHQ6NVY1 386 aaPredicted RBP10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 PPP1R2P3Q6NXS1 205 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 MSANTD2Q6P1R3 559 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 C1orf228Q6PIY5 440 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 PEX26Q7Z412 305 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 NT5DC3Q86UY8 548 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 RALGPS2Q86X27 583 aaPredicted RBP10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 UNC45BQ8IWX7 931 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 KLHL7Q8IXQ5 586 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 DQX1Q8TE96 717 aaKnown RBP10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 WBP2Q969T9 261 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 RAB3IPQ96QF0 476 aaPredicted RBP10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 PSMB7Q99436 277 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 ERP44Q9BS26 406 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 ZDHHC18Q9NUE0 388 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 COX16Q9P0S2 106 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 WDR35Q9P2L0 1181 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 MTRF1LQ9UGC7 380 aaKnown RBP10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 AMFRQ9UKV5 643 aa10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 NDRG2Q9UN36 371 aaKnown RBP10.12□□□□□ -0.79
CHRNA9-201ENST00000310169 ATG2BQ96BY7 2078 aa10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 KANSL1LA0AUZ9 987 aa10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 SUN1O94901 812 aa10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 TRUB2O95900 331 aaKnown RBP10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 TMEM253P0C7T8 217 aa10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 CHRNA3P32297 505 aa10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 CTHP32929 405 aa10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 NOS2P35228 1153 aa10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 CHKAP35790 457 aa10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 MLLT6P55198 1093 aaPredicted RBP10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 SETDB1Q15047 1291 aa10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 DHCR24Q15392 516 aa10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 ANO4Q32M45 955 aa10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 NUGGCQ68CJ6 796 aa10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 TPGS1Q6ZTW0 290 aa10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 BMP8AQ7Z5Y6 402 aa10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 PHF13Q86YI8 300 aaPredicted RBP10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 RFFLQ8WZ73 363 aa10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 MSANTD3Q96H12 275 aa10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 NELL2Q99435 816 aa10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 SLC24A3Q9HC58 644 aa10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 DDIT4Q9NX09 232 aa10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 ADAMTS1Q9UHI8 967 aa10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 STAP1Q9ULZ2 295 aa10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 TLR6Q9Y2C9 796 aa10.11□□□□□ -0.79
CHRNA9-201ENST00000310169 SIT1Q9Y3P8 196 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms