RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 ZNF177Q13360 481 aaPredicted RBP9.34□□□□□ -0.91
PDE4D-201ENST00000309641 LLGL1Q15334 1064 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 PLEKHG6Q3KR16 790 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 PITRM1Q5JRX3 1037 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 TTC39BQ5VTQ0 682 aaPredicted RBP9.34□□□□□ -0.91
PDE4D-201ENST00000309641 RNF219Q5W0B1 726 aaPredicted RBP9.34□□□□□ -0.91
PDE4D-201ENST00000309641 MBLAC2Q68D91 279 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 RFX8Q6ZV50 586 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 POLNQ7Z5Q5 900 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 ZNF366Q8N895 744 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.34□□□□□ -0.91
PDE4D-201ENST00000309641 LRRC57Q8N9N7 239 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 KRT35Q92764 455 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 RPL10LQ96L21 214 aaKnown RBP9.34□□□□□ -0.91
PDE4D-201ENST00000309641 EPAS1Q99814 870 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 FEM1AQ9BSK4 669 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 C1QTNF1Q9BXJ1 281 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 CHRDQ9H2X0 955 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 LZTFL1Q9NQ48 299 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 TMEM51Q9NW97 253 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 CACNA2D2Q9NY47 1150 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 GUCA1BQ9UMX6 200 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 PPP2R2CQ9Y2T4 447 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 ACTL7AQ9Y615 435 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 KMT2EQ8IZD2 1858 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 SGK1O00141 431 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 SPOPO43791 374 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 SNAP91O60641 907 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 ADAM23O75077 832 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 CCDC175P0C221 793 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 RHOQP17081 205 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 ERCC2P18074 760 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 ACVRL1P37023 503 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 TNFRSF4P43489 277 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 RPS9P46781 194 aaKnown RBP9.34□□□□□ -0.91
PDE4D-201ENST00000309641 STK19P49842 368 aaPredicted RBP9.34□□□□□ -0.91
PDE4D-201ENST00000309641 DPYSQ14117 519 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 HADHQ16836 314 aaKnown RBP9.34□□□□□ -0.91
PDE4D-201ENST00000309641 PTPRNQ16849 979 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 DGKKQ5KSL6 1271 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 PSTKQ8IV42 348 aaKnown RBP9.34□□□□□ -0.91
PDE4D-201ENST00000309641 SUGP1Q8IWZ8 645 aaKnown RBP9.34□□□□□ -0.91
PDE4D-201ENST00000309641 NPWQ8N729 165 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 ZNF513Q8N8E2 541 aaPredicted RBP9.34□□□□□ -0.91
PDE4D-201ENST00000309641 RTL3Q8N8U3 475 aaKnown RBP9.34□□□□□ -0.91
PDE4D-201ENST00000309641 TXNDC5Q8NBS9 432 aaKnown RBP9.34□□□□□ -0.91
PDE4D-201ENST00000309641 TEKT4Q8WW24 435 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 TSC1Q92574 1164 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 MYO19Q96H55 970 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 CSPG4P5Q96PW8 444 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 PSMB7Q99436 277 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 NCAPGQ9BPX3 1015 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 KLC2Q9H0B6 622 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 MTG2Q9H4K7 406 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 TMEM248Q9NWD8 314 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 KIAA1522Q9P206 1035 aaPredicted RBP9.34□□□□□ -0.91
PDE4D-201ENST00000309641 PYCARDQ9ULZ3 195 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 PACSIN2Q9UNF0 486 aaPredicted RBP9.34□□□□□ -0.91
PDE4D-201ENST00000309641 STARD13Q9Y3M8 1113 aa9.34□□□□□ -0.91
PDE4D-201ENST00000309641 C3orf70A6NLC5 250 aaPredicted RBP9.33□□□□□ -0.92
PDE4D-201ENST00000309641 NCAM2O15394 837 aa9.33□□□□□ -0.92
PDE4D-201ENST00000309641 PALMO75781 387 aa9.33□□□□□ -0.92
PDE4D-201ENST00000309641 KLF8O95600 359 aaPredicted RBP9.33□□□□□ -0.92
PDE4D-201ENST00000309641 FTCDO95954 541 aa9.33□□□□□ -0.92
PDE4D-201ENST00000309641 MT-CO1P00395 513 aa9.33□□□□□ -0.92
PDE4D-201ENST00000309641 RHOCP08134 193 aa9.33□□□□□ -0.92
PDE4D-201ENST00000309641 HLA-EP13747 358 aa9.33□□□□□ -0.92
PDE4D-201ENST00000309641 IL12RB1P42701 662 aa9.33□□□□□ -0.92
PDE4D-201ENST00000309641 SATB1Q01826 763 aa9.33□□□□□ -0.92
PDE4D-201ENST00000309641 CCDC173Q0VFZ6 552 aa9.33□□□□□ -0.92
PDE4D-201ENST00000309641 DPYSL3Q14195 570 aa9.33□□□□□ -0.92
PDE4D-201ENST00000309641 LRRC32Q14392 662 aa9.33□□□□□ -0.92
PDE4D-201ENST00000309641 ZNF234Q14588 700 aa9.33□□□□□ -0.92
PDE4D-201ENST00000309641 FBXO43Q4G163 708 aa9.33□□□□□ -0.92
PDE4D-201ENST00000309641 ACBD5Q5T8D3 534 aaPredicted RBP9.33□□□□□ -0.92
PDE4D-201ENST00000309641 C11orf63Q6NUN7 778 aa9.33□□□□□ -0.92
PDE4D-201ENST00000309641 TSSK4Q6SA08 328 aa9.33□□□□□ -0.92
PDE4D-201ENST00000309641 TMEM92Q6UXU6 159 aa9.33□□□□□ -0.92
PDE4D-201ENST00000309641 AHI1Q8N157 1196 aa9.33□□□□□ -0.92
PDE4D-201ENST00000309641 FAM71BQ8TC56 605 aa9.33□□□□□ -0.92
PDE4D-201ENST00000309641 CELF6Q96J87 481 aaKnown RBP9.33□□□□□ -0.92
PDE4D-201ENST00000309641 MRGPRX3Q96LB0 322 aa9.33□□□□□ -0.92
PDE4D-201ENST00000309641 CALN1Q9BXU9 219 aa9.33□□□□□ -0.92
PDE4D-201ENST00000309641 MUC3BQ9H195 1237 aa9.33□□□□□ -0.92
PDE4D-201ENST00000309641 SLCO3A1Q9UIG8 710 aa9.33□□□□□ -0.92
PDE4D-201ENST00000309641 RAD54BQ9Y620 910 aa9.33□□□□□ -0.92
PDE4D-201ENST00000309641 CACNA1HO95180 2353 aa9.33□□□□□ -0.92
PDE4D-201ENST00000309641 LRRD1A4D1F6 860 aa9.32□□□□□ -0.92
PDE4D-201ENST00000309641 MAP3K6O95382 1288 aa9.32□□□□□ -0.92
PDE4D-201ENST00000309641 POLR2EP19388 210 aaKnown RBP9.32□□□□□ -0.92
PDE4D-201ENST00000309641 PRKCHP24723 683 aa9.32□□□□□ -0.92
PDE4D-201ENST00000309641 SLC1A1P43005 524 aa9.32□□□□□ -0.92
PDE4D-201ENST00000309641 GNA12Q03113 381 aa9.32□□□□□ -0.92
PDE4D-201ENST00000309641 KRT81Q14533 505 aa9.32□□□□□ -0.92
PDE4D-201ENST00000309641 ZFYVE27Q5T4F4 411 aa9.32□□□□□ -0.92
PDE4D-201ENST00000309641 KIAA1211LQ6NV74 962 aa9.32□□□□□ -0.92
PDE4D-201ENST00000309641 LINGO4Q6UY18 593 aa9.32□□□□□ -0.92
PDE4D-201ENST00000309641 LEKR1Q6ZMV7 388 aa9.32□□□□□ -0.92
PDE4D-201ENST00000309641 SETD3Q86TU7 594 aaPredicted RBP9.32□□□□□ -0.92
PDE4D-201ENST00000309641 NT5DC3Q86UY8 548 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms