RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 TMEM216Q9P0N5 145 aa20.24■□□□□ 0.83
LRFN4-201ENST00000309602 MAGED2Q9UNF1 606 aaPredicted RBP20.24■□□□□ 0.83
LRFN4-201ENST00000309602 ZCWPW2A0A1B0GU75 182 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 DUSP11O75319 330 aaKnown RBP20.23■□□□□ 0.83
LRFN4-201ENST00000309602 F9P00740 461 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 NFKB1P19838 968 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 KHDC1Q4VXA5 237 aaKnown RBP20.23■□□□□ 0.83
LRFN4-201ENST00000309602 CERCAMQ5T4B2 595 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 ATG14Q6ZNE5 492 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 C10orf107Q8IVU9 208 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 DCLK2Q8N568 766 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 TEX9Q8N6V9 391 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.23■□□□□ 0.83
LRFN4-201ENST00000309602 AZIN2Q96A70 460 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 MCUR1Q96AQ8 359 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 EPAS1Q99814 870 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 SNX15Q9NRS6 342 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.23■□□□□ 0.83
LRFN4-201ENST00000309602 ZNF358Q9NW07 568 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 DNAJC16Q9Y2G8 782 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 NUP205Q92621 2012 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 ZNF189O75820 626 aaPredicted RBP20.23■□□□□ 0.83
LRFN4-201ENST00000309602 MX2P20592 715 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 BDNFP23560 247 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 RPL9P32969 192 aaKnown RBP20.23■□□□□ 0.83
LRFN4-201ENST00000309602 SLC1A6P48664 564 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 RSPH3Q86UC2 560 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 FBXO27Q8NI29 283 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 ATXN7L3BQ96GX2 97 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 AGAP2Q99490 1192 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 RBBP8Q99708 897 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 APOL2Q9BQE5 337 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 BRD8Q9H0E9 1235 aa20.23■□□□□ 0.83
LRFN4-201ENST00000309602 ALDH18A1P54886 795 aaKnown RBP20.22■□□□□ 0.83
LRFN4-201ENST00000309602 INSCQ1MX18 579 aa20.22■□□□□ 0.83
LRFN4-201ENST00000309602 ANKRD20A4Q4UJ75 823 aa20.22■□□□□ 0.83
LRFN4-201ENST00000309602 RASAL3Q86YV0 1011 aa20.22■□□□□ 0.83
LRFN4-201ENST00000309602 MFSD3Q96ES6 412 aa20.22■□□□□ 0.83
LRFN4-201ENST00000309602 CELF6Q96J87 481 aaKnown RBP20.22■□□□□ 0.83
LRFN4-201ENST00000309602 RILPQ96NA2 401 aa20.22■□□□□ 0.83
LRFN4-201ENST00000309602 TMLHEQ9NVH6 421 aa20.22■□□□□ 0.83
LRFN4-201ENST00000309602 B2RBV5 119 aa20.22■□□□□ 0.83
LRFN4-201ENST00000309602 TNPO2O14787 897 aaKnown RBP20.22■□□□□ 0.83
LRFN4-201ENST00000309602 ATP9BO43861 1147 aa20.22■□□□□ 0.83
LRFN4-201ENST00000309602 USP1O94782 785 aa20.22■□□□□ 0.83
LRFN4-201ENST00000309602 MAGEA12P43365 314 aa20.22■□□□□ 0.83
LRFN4-201ENST00000309602 BRCC3P46736 316 aa20.22■□□□□ 0.83
LRFN4-201ENST00000309602 RCN2Q14257 317 aa20.22■□□□□ 0.83
LRFN4-201ENST00000309602 PM20D1Q6GTS8 502 aa20.22■□□□□ 0.83
LRFN4-201ENST00000309602 STRA8Q7Z7C7 330 aa20.22■□□□□ 0.83
LRFN4-201ENST00000309602 PIWIL2Q8TC59 973 aaKnown RBP20.22■□□□□ 0.83
LRFN4-201ENST00000309602 SOCS4Q8WXH5 440 aa20.22■□□□□ 0.83
LRFN4-201ENST00000309602 CCDC106Q9BWC9 280 aa20.22■□□□□ 0.83
LRFN4-201ENST00000309602 TRHDEQ9UKU6 1024 aa20.22■□□□□ 0.83
LRFN4-201ENST00000309602 SHROOM3Q8TF72 1996 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 SCN10AQ9Y5Y9 1956 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 MTSS1O43312 755 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 MGEA5O60502 916 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 PGK1P00558 417 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 POMCP01189 267 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 SERPINE1P05121 402 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 ODC1P11926 461 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 SERPINB6P35237 376 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 MGAT3Q09327 533 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 KPNB1Q14974 876 aaKnown RBP20.21■□□□□ 0.83
LRFN4-201ENST00000309602 FAM171BQ6P995 826 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 MRPL10Q7Z7H8 261 aaKnown RBP20.21■□□□□ 0.83
LRFN4-201ENST00000309602 GPATCH11Q8N954 259 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 ZSCAN18Q8TBC5 510 aaPredicted RBP20.21■□□□□ 0.83
LRFN4-201ENST00000309602 DPF3Q92784 378 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 ISL2Q96A47 359 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 UBP1Q9NZI7 540 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 COPG2Q9UBF2 871 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 ERI2A8K979 691 aaKnown RBP20.21■□□□□ 0.83
LRFN4-201ENST00000309602 JCHAINP01591 159 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 ARRB2P32121 409 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 ABCG1P45844 678 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 LIMK2P53671 638 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 ITPRIPL1Q6GPH6 555 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 SERINC5Q86VE9 423 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 PLD6Q8N2A8 252 aaKnown RBP20.21■□□□□ 0.83
LRFN4-201ENST00000309602 DQX1Q8TE96 717 aaKnown RBP20.21■□□□□ 0.83
LRFN4-201ENST00000309602 HASPINQ8TF76 798 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 IRGQQ8WZA9 623 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 TEKT5Q96M29 485 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 TMEM209Q96SK2 561 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 NMRK2Q9NPI5 230 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 ADAM28Q9UKQ2 775 aa20.21■□□□□ 0.83
LRFN4-201ENST00000309602 ARHGAP42A6NI28 874 aa20.2■□□□□ 0.82
LRFN4-201ENST00000309602 KPNA6O60684 536 aa20.2■□□□□ 0.82
LRFN4-201ENST00000309602 B3GAT3O94766 335 aa20.2■□□□□ 0.82
LRFN4-201ENST00000309602 SERPINA6P08185 405 aa20.2■□□□□ 0.82
LRFN4-201ENST00000309602 TPH1P17752 444 aa20.2■□□□□ 0.82
LRFN4-201ENST00000309602 CTGFP29279 349 aa20.2■□□□□ 0.82
LRFN4-201ENST00000309602 SPRP35270 261 aaPredicted RBP20.2■□□□□ 0.82
LRFN4-201ENST00000309602 ZNF157P51786 506 aaPredicted RBP20.2■□□□□ 0.82
LRFN4-201ENST00000309602 TUBB3Q13509 450 aa20.2■□□□□ 0.82
LRFN4-201ENST00000309602 UBAP2LQ14157 1087 aaKnown RBP20.2■□□□□ 0.82
LRFN4-201ENST00000309602 HSP90AA5PQ58FG0 334 aa20.2■□□□□ 0.82
LRFN4-201ENST00000309602 ACSBG2Q5FVE4 666 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms