RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 MAGED2Q9UNF1 606 aaPredicted RBP21.77■■□□□ 1.08
ATG4D-201ENST00000309469 SLC12A8A0AV02 714 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 ARHGAP42A6NI28 874 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 KRT4P19013 534 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 NFKB1P19838 968 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 MGAT1P26572 445 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 QPCTQ16769 361 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 CASC4Q6P4E1 433 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 FBXO46Q6PJ61 603 aaPredicted RBP21.76■■□□□ 1.07
ATG4D-201ENST00000309469 TMCO2Q7Z6W1 182 aaPredicted RBP21.76■■□□□ 1.07
ATG4D-201ENST00000309469 TAX1BP1Q86VP1 789 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 CCNJLQ8IV13 435 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 CTAGE3PQ8IX95 158 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 CKAP2Q8WWK9 683 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 BTN2A3PQ96KV6 586 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 ZNF558Q96NG5 402 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 SSU72Q9NP77 194 aaKnown RBP21.76■■□□□ 1.07
ATG4D-201ENST00000309469 PIH1D1Q9NWS0 290 aaKnown RBP21.76■■□□□ 1.07
ATG4D-201ENST00000309469 VANGL2Q9ULK5 521 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 COL4A6Q14031 1691 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 ERI2A8K979 691 aaKnown RBP21.76■■□□□ 1.07
ATG4D-201ENST00000309469 CXorf49A8MYA2 514 aaPredicted RBP21.76■■□□□ 1.07
ATG4D-201ENST00000309469 MAFKO60675 156 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 IGLV3-27P01718 113 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 SOD2P04179 222 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 CCNB1P14635 433 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 ITGB8P26012 769 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 STEAP4Q687X5 459 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 NUGGCQ68CJ6 796 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 KCTD11Q693B1 232 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 FAM117BQ6P1L5 589 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 CYS1Q717R9 158 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 SRLQ86TD4 932 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 SLC39A11Q8N1S5 342 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 CNTD1Q8N815 330 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 DENND1AQ8TEH3 1009 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 ARNTL2Q8WYA1 636 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 MLPHQ9BV36 600 aaPredicted RBP21.76■■□□□ 1.07
ATG4D-201ENST00000309469 CCSER2Q9H7U1 834 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 SMYD2Q9NRG4 433 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 FNIP2Q9P278 1114 aa21.76■■□□□ 1.07
ATG4D-201ENST00000309469 PPARGC1AQ9UBK2 798 aaKnown RBP21.76■■□□□ 1.07
ATG4D-201ENST00000309469 AFF4Q9UHB7 1163 aaKnown RBP21.76■■□□□ 1.07
ATG4D-201ENST00000309469 MRPL42Q9Y6G3 142 aaKnown RBP21.76■■□□□ 1.07
ATG4D-201ENST00000309469 FAM159BA6NKW6 160 aa21.75■■□□□ 1.07
ATG4D-201ENST00000309469 TYROBPO43914 113 aa21.75■■□□□ 1.07
ATG4D-201ENST00000309469 TIMP1P01033 207 aa21.75■■□□□ 1.07
ATG4D-201ENST00000309469 RHOQP17081 205 aa21.75■■□□□ 1.07
ATG4D-201ENST00000309469 GBP2P32456 591 aaPredicted RBP21.75■■□□□ 1.07
ATG4D-201ENST00000309469 CRADDP78560 199 aa21.75■■□□□ 1.07
ATG4D-201ENST00000309469 DEFB103AP81534 67 aa21.75■■□□□ 1.07
ATG4D-201ENST00000309469 TRMT10BQ6PF06 316 aaKnown RBP21.75■■□□□ 1.07
ATG4D-201ENST00000309469 SPATS2Q86XZ4 545 aaKnown RBP21.75■■□□□ 1.07
ATG4D-201ENST00000309469 LRRC34Q8IZ02 419 aa21.75■■□□□ 1.07
ATG4D-201ENST00000309469 GDAP1Q8TB36 358 aa21.75■■□□□ 1.07
ATG4D-201ENST00000309469 ARMC5Q96C12 935 aa21.75■■□□□ 1.07
ATG4D-201ENST00000309469 NAT9Q9BTE0 207 aa21.75■■□□□ 1.07
ATG4D-201ENST00000309469 PRDM5Q9NQX1 630 aaPredicted RBP21.75■■□□□ 1.07
ATG4D-201ENST00000309469 MOCS1Q9NZB8 636 aa21.75■■□□□ 1.07
ATG4D-201ENST00000309469 ZNF180Q9UJW8 692 aa21.75■■□□□ 1.07
ATG4D-201ENST00000309469 RRP15Q9Y3B9 282 aaKnown RBP21.75■■□□□ 1.07
ATG4D-201ENST00000309469 MATN3O15232 486 aa21.74■■□□□ 1.07
ATG4D-201ENST00000309469 TLR5O60602 858 aa21.74■■□□□ 1.07
ATG4D-201ENST00000309469 HMBSP08397 361 aa21.74■■□□□ 1.07
ATG4D-201ENST00000309469 CSF2RAP15509 400 aa21.74■■□□□ 1.07
ATG4D-201ENST00000309469 PGAM1P18669 254 aa21.74■■□□□ 1.07
ATG4D-201ENST00000309469 RING1Q06587 406 aa21.74■■□□□ 1.07
ATG4D-201ENST00000309469 PRPSAP1Q14558 356 aa21.74■■□□□ 1.07
ATG4D-201ENST00000309469 LRRC49Q8IUZ0 686 aa21.74■■□□□ 1.07
ATG4D-201ENST00000309469 OR52K1Q8NGK4 314 aa21.74■■□□□ 1.07
ATG4D-201ENST00000309469 USP33Q8TEY7 942 aa21.74■■□□□ 1.07
ATG4D-201ENST00000309469 ZYG11BQ9C0D3 744 aa21.74■■□□□ 1.07
ATG4D-201ENST00000309469 CACNG3O60359 315 aa21.74■■□□□ 1.07
ATG4D-201ENST00000309469 ALDH1A2O94788 518 aa21.74■■□□□ 1.07
ATG4D-201ENST00000309469 ABLIM3O94929 683 aa21.74■■□□□ 1.07
ATG4D-201ENST00000309469 SEC24AO95486 1093 aa21.74■■□□□ 1.07
ATG4D-201ENST00000309469 MT-ND3P03897 115 aa21.74■■□□□ 1.07
ATG4D-201ENST00000309469 VIMP08670 466 aaKnown RBP21.74■■□□□ 1.07
ATG4D-201ENST00000309469 CA4P22748 312 aa21.74■■□□□ 1.07
ATG4D-201ENST00000309469 RPA3P35244 121 aaPredicted RBP21.74■■□□□ 1.07
ATG4D-201ENST00000309469 PAPOLAP51003 745 aaKnown RBP21.74■■□□□ 1.07
ATG4D-201ENST00000309469 KPNA1P52294 538 aaPredicted RBP21.74■■□□□ 1.07
ATG4D-201ENST00000309469 WDR4P57081 412 aaKnown RBP21.74■■□□□ 1.07
ATG4D-201ENST00000309469 DSG1Q02413 1049 aa21.74■■□□□ 1.07
ATG4D-201ENST00000309469 OLIG2Q13516 323 aa21.74■■□□□ 1.07
ATG4D-201ENST00000309469 TTC39BQ5VTQ0 682 aaPredicted RBP21.74■■□□□ 1.07
ATG4D-201ENST00000309469 ZNF461Q8TAF7 563 aa21.74■■□□□ 1.07
ATG4D-201ENST00000309469 TMEM169Q96HH4 297 aa21.74■■□□□ 1.07
ATG4D-201ENST00000309469 IL12RB2Q99665 862 aa21.74■■□□□ 1.07
ATG4D-201ENST00000309469 RC3H2Q9HBD1 1191 aaKnown RBP21.74■■□□□ 1.07
ATG4D-201ENST00000309469 CASS4Q9NQ75 786 aa21.74■■□□□ 1.07
ATG4D-201ENST00000309469 SYBUQ9NX95 663 aa21.74■■□□□ 1.07
ATG4D-201ENST00000309469 IGLV3-10A0A075B6K4 115 aa21.73■■□□□ 1.07
ATG4D-201ENST00000309469 TRIM43BA6NCK2 446 aa21.73■■□□□ 1.07
ATG4D-201ENST00000309469 USP12O75317 370 aa21.73■■□□□ 1.07
ATG4D-201ENST00000309469 FAM155BO75949 473 aa21.73■■□□□ 1.07
ATG4D-201ENST00000309469 BTG3Q14201 252 aaPredicted RBP21.73■■□□□ 1.07
ATG4D-201ENST00000309469 ACBD5Q5T8D3 534 aaPredicted RBP21.73■■□□□ 1.07
ATG4D-201ENST00000309469 TIGD7Q6NT04 549 aaPredicted RBP21.73■■□□□ 1.07
ATG4D-201ENST00000309469 UMODL1-AS1Q8N2C9 162 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms