RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 C18orf8Q96DM3 657 aa8.53□□□□□ -1.04
CHD6-201ENST00000309279 RPGRIP1Q96KN7 1286 aa8.53□□□□□ -1.04
CHD6-201ENST00000309279 RBM14Q96PK6 669 aaKnown RBP8.53□□□□□ -1.04
CHD6-201ENST00000309279 FAM129BQ96TA1 746 aa8.53□□□□□ -1.04
CHD6-201ENST00000309279 MIS12Q9H081 205 aa8.53□□□□□ -1.04
CHD6-201ENST00000309279 RNF38Q9H0F5 515 aa8.53□□□□□ -1.04
CHD6-201ENST00000309279 CCDC68Q9H2F9 335 aa8.53□□□□□ -1.04
CHD6-201ENST00000309279 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.53□□□□□ -1.04
CHD6-201ENST00000309279 SPATA7Q9P0W8 599 aa8.53□□□□□ -1.04
CHD6-201ENST00000309279 ARHGAP20Q9P2F6 1191 aa8.53□□□□□ -1.04
CHD6-201ENST00000309279 IMPACTQ9P2X3 320 aa8.53□□□□□ -1.04
CHD6-201ENST00000309279 TJP2Q9UDY2 1190 aa8.53□□□□□ -1.04
CHD6-201ENST00000309279 HELZP42694 1942 aaKnown RBP8.53□□□□□ -1.04
CHD6-201ENST00000309279 TRAV19A0A0A6YYK7 116 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 GOLGA6L10A0A0M3HER8 536 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 SSU72P8A0A1W2PR75 194 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 PIK3R2O00459 728 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 DDX3XO00571 662 aaKnown RBP eCLIP8.52□□□□□ -1.05
CHD6-201ENST00000309279 DNTTP04053 509 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 ERBB2P04626 1255 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 FYNP06241 537 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 GLI1P08151 1106 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 PLEKP08567 350 aaPredicted RBP8.52□□□□□ -1.05
CHD6-201ENST00000309279 HDCP19113 662 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 FCARP24071 287 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 GSCP56915 257 aaPredicted RBP8.52□□□□□ -1.05
CHD6-201ENST00000309279 YWHAGP61981 247 aaKnown RBP eCLIP8.52□□□□□ -1.05
CHD6-201ENST00000309279 SLC7A9P82251 487 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 PTP4A2Q12974 167 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 ZNF268Q14587 947 aaPredicted RBP8.52□□□□□ -1.05
CHD6-201ENST00000309279 ASTE1Q2TB18 679 aaPredicted RBP8.52□□□□□ -1.05
CHD6-201ENST00000309279 FAM78AQ5JUQ0 283 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 BSPRYQ5W0U4 402 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 SLC6A19Q695T7 634 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 ACAD10Q6JQN1 1059 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 CNSTQ6PJW8 725 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 KDELC1Q6UW63 502 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 OLFML1Q6UWY5 402 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 SLC41A1Q8IVJ1 513 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 ARID3BQ8IVW6 561 aaPredicted RBP8.52□□□□□ -1.05
CHD6-201ENST00000309279 PEX5LQ8IYB4 626 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 ARL14EPQ8N8R7 260 aaPredicted RBP8.52□□□□□ -1.05
CHD6-201ENST00000309279 CCT6BQ92526 530 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 KHSRPQ92945 711 aaKnown RBP eCLIP8.52□□□□□ -1.05
CHD6-201ENST00000309279 ALKBH8Q96BT7 664 aaKnown RBP8.52□□□□□ -1.05
CHD6-201ENST00000309279 VCPIP1Q96JH7 1222 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 SLC22A12Q96S37 553 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 CYP2S1Q96SQ9 504 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 CDK5RAP1Q96SZ6 601 aaKnown RBP8.52□□□□□ -1.05
CHD6-201ENST00000309279 SLITRK6Q9H5Y7 841 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 ABCC13Q9NSE7 274 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 ASNSD1Q9NWL6 643 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 SCHIP1Q9P0W5 487 aaPredicted RBP8.52□□□□□ -1.05
CHD6-201ENST00000309279 NAGPAQ9UK23 515 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 STRIP2Q9ULQ0 834 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 ANGPTL3Q9Y5C1 460 aa8.52□□□□□ -1.05
CHD6-201ENST00000309279 COCHO43405 550 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 ECI2O75521 394 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 LTFP02788 710 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 CAPNS1P04632 268 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 MYBL2P10244 700 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 RALAP11233 206 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 RARGP13631 454 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 STMN1P16949 149 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 SP100P23497 879 aaPredicted RBP8.51□□□□□ -1.05
CHD6-201ENST00000309279 MPSTP25325 297 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 ATP5C1P36542 298 aaKnown RBP8.51□□□□□ -1.05
CHD6-201ENST00000309279 AVPR1AP37288 418 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 NSFP46459 744 aaKnown RBP8.51□□□□□ -1.05
CHD6-201ENST00000309279 YWHAZP63104 245 aaKnown RBP8.51□□□□□ -1.05
CHD6-201ENST00000309279 ZXDBP98169 803 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 SLC6A3Q01959 620 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 C1QBPQ07021 282 aaKnown RBP8.51□□□□□ -1.05
CHD6-201ENST00000309279 GOLGA8FQ08AF8 430 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 GOLGA8DPQ0D2H9 430 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 HTR4Q13639 388 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 TDRD12Q587J7 1177 aaKnown RBP8.51□□□□□ -1.05
CHD6-201ENST00000309279 EFHC1Q5JVL4 640 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 PARM1Q6UWI2 310 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 HFE2Q6ZVN8 426 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 MTSS1LQ765P7 747 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 CCDC80Q76M96 950 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 MON1BQ7L1V2 547 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 SLC26A9Q7LBE3 791 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 ARCQ7LC44 396 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 TADA2BQ86TJ2 420 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 VPS36Q86VN1 386 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 XYLT1Q86Y38 959 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 HDAC2Q92769 488 aaKnown RBP8.51□□□□□ -1.05
CHD6-201ENST00000309279 FGF14Q92915 247 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 USP13Q92995 863 aaPredicted RBP8.51□□□□□ -1.05
CHD6-201ENST00000309279 ELSPBP1Q96BH3 223 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 ANAPC16Q96DE5 110 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 PIWIL1Q96J94 861 aaKnown RBP8.51□□□□□ -1.05
CHD6-201ENST00000309279 RADILQ96JH8 1075 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 CNDP1Q96KN2 507 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 PANX2Q96RD6 677 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 CHP1Q99653 195 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 SH3GL1Q99961 368 aa8.51□□□□□ -1.05
CHD6-201ENST00000309279 TRIM62Q9BVG3 475 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms