RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 RUNDC3BQ96NL0 473 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 PTCHD1Q96NR3 888 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 NECTIN4Q96NY8 510 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 SPAG5Q96R06 1193 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 CCT8L2Q96SF2 557 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 NCAPGQ9BPX3 1015 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 SH2D3AQ9BRG2 576 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 POLR3CQ9BUI4 534 aaPredicted RBP5.15□□□□□ -1.59
CKS1B-201ENST00000308987 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.15□□□□□ -1.59
CKS1B-201ENST00000308987 TMEM109Q9BVC6 243 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 RAB17Q9H0T7 212 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 CARD9Q9H257 536 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 NRDE2Q9H7Z3 1164 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 GP6Q9HCN6 339 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 OLFML3Q9NRN5 406 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 TBC1D13Q9NVG8 400 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 PRR13Q9NZ81 148 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 GABBR1Q9UBS5 961 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 SEL1LQ9UBV2 794 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 FAM153AQ9UHL3 310 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 SLC12A6Q9UHW9 1150 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 DNM3Q9UQ16 869 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 AKT3Q9Y243 479 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 PLAAQ9Y263 795 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 LOC400499M0QZD8 3231 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 EML5Q05BV3 1969 aa5.15□□□□□ -1.59
CKS1B-201ENST00000308987 COL4A2P08572 1712 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 FREM2Q5SZK8 3169 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 BPTFQ12830 3046 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 IGKV6-21A0A0C4DH24 114 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.14□□□□□ -1.59
CKS1B-201ENST00000308987 MROH6A6NGR9 719 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 MIF4GDA9UHW6 222 aaKnown RBP5.14□□□□□ -1.59
CKS1B-201ENST00000308987 KRIT1O00522 736 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 CHUKO15111 745 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 TRAPPC3O43617 180 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 CEP104O60308 925 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 ZC3H11AO75152 810 aaKnown RBP eCLIP5.14□□□□□ -1.59
CKS1B-201ENST00000308987 PPFIA2O75334 1257 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 DDHD2O94830 711 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 KRT14P02533 472 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 KRT18P05783 430 aaKnown RBP5.14□□□□□ -1.59
CKS1B-201ENST00000308987 CNPP09543 421 aaKnown RBP5.14□□□□□ -1.59
CKS1B-201ENST00000308987 NUDT17P0C025 328 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 GLULP15104 373 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 NR2F2P24468 414 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 PON1P27169 355 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 ECHS1P30084 290 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 PPM1AP35813 382 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 HSD17B3P37058 310 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 ID4P47928 161 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 CLCN4P51793 760 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 PTENP60484 403 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 PPP2R2AP63151 447 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 PRKCEQ02156 737 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 KRT17Q04695 432 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 SPIRE1Q08AE8 756 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 IFFO1Q0D2I5 559 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 BYSLQ13895 437 aaKnown RBP5.14□□□□□ -1.59
CKS1B-201ENST00000308987 GIT2Q14161 759 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 HLTFQ14527 1009 aaKnown RBP eCLIP5.14□□□□□ -1.59
CKS1B-201ENST00000308987 PPP2R5AQ15172 486 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 ANGPT1Q15389 498 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 CEP85LQ5SZL2 805 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 CES5AQ6NT32 575 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 MIS18BP1Q6P0N0 1132 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 B3GNT9Q6UX72 402 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 CCDC121Q6ZUS5 278 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 STXBP4Q6ZWJ1 553 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 PEX26Q7Z412 305 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 ADAT2Q7Z6V5 191 aaKnown RBP5.14□□□□□ -1.59
CKS1B-201ENST00000308987 GPR149Q86SP6 731 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 DDX53Q86TM3 631 aaKnown RBP5.14□□□□□ -1.59
CKS1B-201ENST00000308987 NT5DC3Q86UY8 548 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 HOOK3Q86VS8 718 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 RHOT2Q8IXI1 618 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 CCDC105Q8IYK2 499 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 LINC00482Q8N8I6 264 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 ST13P5Q8NFI4 369 aaPredicted RBP5.14□□□□□ -1.59
CKS1B-201ENST00000308987 ADCY4Q8NFM4 1077 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 SLC30A5Q8TAD4 765 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 ETNPPLQ8TBG4 499 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 RFFLQ8WZ73 363 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 RNF34Q969K3 372 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 TLCD1Q96CP7 247 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 TSPAN17Q96FV3 270 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 PGM2Q96G03 612 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 EEF2KMTQ96G04 330 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 FCRL3Q96P31 734 aaPredicted RBP5.14□□□□□ -1.59
CKS1B-201ENST00000308987 KLHL5Q96PQ7 755 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 MYADMQ96S97 322 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 CDK5RAP1Q96SZ6 601 aaKnown RBP5.14□□□□□ -1.59
CKS1B-201ENST00000308987 ZNF577Q9BSK1 485 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 SPON2Q9BUD6 331 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 STK33Q9BYT3 514 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 STMN4Q9H169 189 aaPredicted RBP5.14□□□□□ -1.59
CKS1B-201ENST00000308987 UNC45AQ9H3U1 944 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 MINDY3Q9H8M7 445 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 SIX2Q9NPC8 291 aa5.14□□□□□ -1.59
CKS1B-201ENST00000308987 CYP26B1Q9NR63 512 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms