RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 PPFIA2O75334 1257 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 OLFM2O95897 454 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 GJA1P17302 382 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 TACR2P21452 398 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 SLC6A4P31645 630 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 CCR2P41597 374 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 KPNA1P52294 538 aaPredicted RBP7.15□□□□□ -1.26
PTCD2-201ENST00000308077 CBX1P83916 185 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 GAD2Q05329 585 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 DHX9Q08211 1270 aaKnown RBP7.15□□□□□ -1.26
PTCD2-201ENST00000308077 GALNT2Q10471 571 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 PDK1Q15118 436 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 ALFQ53S48 1182 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 PPM1LQ5SGD2 360 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 STXBP5Q5T5C0 1151 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 ARHGAP36Q6ZRI8 547 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 BZW1Q7L1Q6 419 aaKnown RBP7.15□□□□□ -1.26
PTCD2-201ENST00000308077 CIR1Q86X95 450 aaPredicted RBP7.15□□□□□ -1.26
PTCD2-201ENST00000308077 ARL14EPQ8N8R7 260 aaPredicted RBP7.15□□□□□ -1.26
PTCD2-201ENST00000308077 RTL3Q8N8U3 475 aaKnown RBP7.15□□□□□ -1.26
PTCD2-201ENST00000308077 GDPD5Q8WTR4 605 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 HTR3CQ8WXA8 447 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 CPT1BQ92523 772 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 PLD4Q96BZ4 506 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 LRRC45Q96CN5 670 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 P2RY11Q96G91 374 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 CORO1BQ9BR76 489 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 EPB41L4BQ9H329 900 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 NOL6Q9H6R4 1146 aaKnown RBP7.15□□□□□ -1.26
PTCD2-201ENST00000308077 CATSPERBQ9H7T0 1116 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 DNAJC17Q9NVM6 304 aaKnown RBP7.15□□□□□ -1.26
PTCD2-201ENST00000308077 PPARGC1AQ9UBK2 798 aaKnown RBP7.15□□□□□ -1.26
PTCD2-201ENST00000308077 ZNF212Q9UDV6 495 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 SLC12A6Q9UHW9 1150 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 TPX2Q9ULW0 747 aaKnown RBP7.15□□□□□ -1.26
PTCD2-201ENST00000308077 RAD54BQ9Y620 910 aa7.15□□□□□ -1.26
PTCD2-201ENST00000308077 TEP1Q99973 2627 aaKnown RBP7.15□□□□□ -1.26
PTCD2-201ENST00000308077 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.15□□□□□ -1.27
PTCD2-201ENST00000308077 A0A1W2PRU2 124 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 C5orf60A6NFR6 353 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 DRGXA6NNA5 263 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 PPP1R12AO14974 1030 aaPredicted RBP7.15□□□□□ -1.27
PTCD2-201ENST00000308077 RRP9O43818 475 aaKnown RBP7.15□□□□□ -1.27
PTCD2-201ENST00000308077 ACSL4O60488 711 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 GREM1O60565 184 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 LPXNO60711 386 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 GCATO75600 419 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 TMEM63AO94886 807 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 IRF1P10914 325 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 MBL2P11226 248 aaPredicted RBP7.15□□□□□ -1.27
PTCD2-201ENST00000308077 CORO1AP31146 461 aaKnown RBP7.15□□□□□ -1.27
PTCD2-201ENST00000308077 SERPINB6P35237 376 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 GARSP41250 739 aaKnown RBP7.15□□□□□ -1.27
PTCD2-201ENST00000308077 COG7P83436 770 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 CAV1Q03135 178 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 PPIDQ08752 370 aaKnown RBP7.15□□□□□ -1.27
PTCD2-201ENST00000308077 AP1B1Q10567 949 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 WASHC5Q12768 1159 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 KCNJ11Q14654 390 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 PABPC1LQ4VXU2 614 aaKnown RBP7.15□□□□□ -1.27
PTCD2-201ENST00000308077 FAXCQ5TGI0 409 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 AFMIDQ63HM1 303 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 HEATR6Q6AI08 1181 aaKnown RBP7.15□□□□□ -1.27
PTCD2-201ENST00000308077 RFWD3Q6PCD5 774 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 PDZD4Q76G19 769 aaPredicted RBP7.15□□□□□ -1.27
PTCD2-201ENST00000308077 MTERF4Q7Z6M4 381 aaKnown RBP7.15□□□□□ -1.27
PTCD2-201ENST00000308077 TFAP2DQ7Z6R9 452 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 RBM23Q86U06 439 aaKnown RBP7.15□□□□□ -1.27
PTCD2-201ENST00000308077 CHSY1Q86X52 802 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 DENND1CQ8IV53 801 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 NAT8LQ8N9F0 302 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 BBOF1Q8ND07 529 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 CCNYQ8ND76 341 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 PRCCQ92733 491 aaPredicted RBP7.15□□□□□ -1.27
PTCD2-201ENST00000308077 HDAC11Q96DB2 347 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 TCEAL4Q96EI5 215 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 CEP41Q9BYV8 373 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 ZYG11BQ9C0D3 744 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 SLC39A8Q9C0K1 460 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 VIPAS39Q9H9C1 493 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 SMPD4Q9NXE4 827 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 PAK5Q9P286 719 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 MTRF1LQ9UGC7 380 aaKnown RBP7.15□□□□□ -1.27
PTCD2-201ENST00000308077 ATP8A1Q9Y2Q0 1164 aa7.15□□□□□ -1.27
PTCD2-201ENST00000308077 PTPN13Q12923 2485 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 CHD5Q8TDI0 1954 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.14□□□□□ -1.27
PTCD2-201ENST00000308077 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.14□□□□□ -1.27
PTCD2-201ENST00000308077 H3BQF6 201 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 AGPSO00116 658 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 KCNK1O00180 336 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 RNF103O00237 685 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 DFFAO00273 331 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 NCAM2O15394 837 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 MOSPD3O75425 235 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 METTL18O95568 372 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 MYL4P12829 197 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 RHOQP17081 205 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 HSD17B3P37058 310 aa7.14□□□□□ -1.27
PTCD2-201ENST00000308077 SGSHP51688 502 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms