RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 STOML2Q9UJZ1 356 aa13.18□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 TBX10O75333 385 aa13.17□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 STC2O76061 302 aa13.17□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 LTBRP36941 435 aa13.17□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 GARSP41250 739 aaKnown RBP13.17□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 KCNQ1P51787 676 aa13.17□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 RARS2Q5T160 578 aaKnown RBP13.17□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 STXBP5Q5T5C0 1151 aa13.17□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 TXNDC8Q6A555 127 aa13.17□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 NADSYN1Q6IA69 706 aa13.17□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 FBXL22Q6P050 247 aa13.17□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 POTEHQ6S545 545 aa13.17□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 ARHGAP12Q8IWW6 846 aa13.17□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 NAT8LQ8N9F0 302 aa13.17□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 TSEN2Q8NCE0 465 aaKnown RBP13.17□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 MRPS31Q92665 395 aaKnown RBP13.17□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 FATE1Q969F0 183 aa13.17□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 P2RY11Q96G91 374 aa13.17□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 PKNOX2Q96KN3 472 aa13.17□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 ZFRQ96KR1 1074 aaKnown RBP13.17□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 GDAP1L1Q96MZ0 367 aa13.17□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 LGMNQ99538 433 aa13.17□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 S1PR5Q9H228 398 aa13.17□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 REV3LO60673 3130 aa13.17□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 A0A0A0MRY4 1105 aa13.16□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 CHADO15335 359 aa13.16□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 OPHN1O60890 802 aa13.16□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 STK10O94804 968 aaKnown RBP13.16□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 MAP3K6O95382 1288 aa13.16□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 HMBSP08397 361 aa13.16□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 VAV1P15498 845 aa13.16□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 HOXB8P17481 243 aaPredicted RBP13.16□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 CCNCP24863 283 aa13.16□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 GGCXP38435 758 aa13.16□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 NDST2P52849 883 aa13.16□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 SLC7A9P82251 487 aa13.16□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 DLX2Q07687 328 aaPredicted RBP13.16□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 CPT1BQ92523 772 aa13.16□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 PRCCQ92733 491 aaPredicted RBP13.16□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 SPATA13Q96N96 652 aa13.16□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 GCNAQ96QF7 691 aa13.16□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 VAT1Q99536 393 aa13.16□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 SLC46A2Q9BY10 475 aa13.16□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 FRMD8Q9BZ67 464 aaPredicted RBP13.16□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 ATXN3LQ9H3M9 355 aa13.16□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 ZNF212Q9UDV6 495 aa13.16□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 VANGL2Q9ULK5 521 aa13.16□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 C2orf16Q68DN1 1984 aa13.16□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 KLKB1P03952 638 aa13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 HDCP19113 662 aa13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 TACR2P21452 398 aa13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 DDX6P26196 483 aaKnown RBP eCLIP13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 HSD17B3P37058 310 aa13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 PMS2P54278 862 aa13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 ZXDBP98169 803 aa13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 WASHC5Q12768 1159 aa13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 TEAD2Q15562 447 aa13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 FAM133BQ5BKY9 247 aaKnown RBP13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 CFAP58Q5T655 872 aa13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 B4GALNT4Q76KP1 1039 aa13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 TRMT10CQ7L0Y3 403 aaKnown RBP13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 TP53INP2Q8IXH6 220 aa13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 PLCD3Q8N3E9 789 aa13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 ARL14EPQ8N8R7 260 aaPredicted RBP13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 CCNYQ8ND76 341 aa13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 ZSCAN18Q8TBC5 510 aaPredicted RBP13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 ADAMTS19Q8TE59 1207 aa13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 MSLNLQ96KJ4 702 aa13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 GUCD1Q96NT3 240 aa13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 CYP2S1Q96SQ9 504 aa13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 DDX50Q9BQ39 737 aaKnown RBP13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 PABPC3Q9H361 631 aaKnown RBP13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 PIDD1Q9HB75 910 aa13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 GKN1Q9NS71 199 aa13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 CDH22Q9UJ99 828 aa13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 TRHDEQ9UKU6 1024 aa13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 DOCK4Q8N1I0 1966 aa13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 PRUNE2Q8WUY3 3088 aa13.15□□□□□ -0.3
SHANK2-AS3-201ENST00000307548 ZNF197O14709 1029 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 EIF3HO15372 352 aaKnown RBP eCLIP13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 MBL2P11226 248 aaPredicted RBP13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CEBPBP17676 345 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 IGFBP4P22692 258 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 FDFT1P37268 417 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 MAPKAPK2P49137 400 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 YBEYP58557 167 aaPredicted RBP13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 AP1B1Q10567 949 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 KCNJ11Q14654 390 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 UAP1Q16222 522 aaPredicted RBP13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ANKRD20A2Q5SQ80 823 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ADGRF1Q5T601 910 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ANKRD20A1Q5TYW2 823 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ANKRD20A3Q5VUR7 823 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 RAP1GAP2Q684P5 730 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 LRIG3Q6UXM1 1119 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CHSY1Q86X52 802 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 CCDC13Q8IYE1 715 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 MAB21L3Q8N8X9 362 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 MCUQ8NE86 351 aa13.15□□□□□ -0.31
SHANK2-AS3-201ENST00000307548 ITFG1Q8TB96 612 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 241.2 ms