RNA–Protein interactions for RNA: ENST00000307301.11

MRPL39-201, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MRPL39, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-201ENST00000307301 HDAC4P56524 1084 aa21.42■■□□□ 1.02
MRPL39-201ENST00000307301 RPL7AP62424 266 aaKnown RBP21.42■■□□□ 1.02
MRPL39-201ENST00000307301 PPP1R15BQ5SWA1 713 aa21.42■■□□□ 1.02
MRPL39-201ENST00000307301 ACBD5Q5T8D3 534 aaPredicted RBP21.42■■□□□ 1.02
MRPL39-201ENST00000307301 LRSAM1Q6UWE0 723 aa21.42■■□□□ 1.02
MRPL39-201ENST00000307301 DNAAF5Q86Y56 855 aa21.42■■□□□ 1.02
MRPL39-201ENST00000307301 CENPIQ92674 756 aaPredicted RBP21.42■■□□□ 1.02
MRPL39-201ENST00000307301 RMDN1Q96DB5 314 aa21.42■■□□□ 1.02
MRPL39-201ENST00000307301 ALG14Q96F25 216 aa21.42■■□□□ 1.02
MRPL39-201ENST00000307301 MCEEQ96PE7 176 aa21.42■■□□□ 1.02
MRPL39-201ENST00000307301 ITM2CQ9NQX7 267 aa21.42■■□□□ 1.02
MRPL39-201ENST00000307301 VPS45Q9NRW7 570 aa21.42■■□□□ 1.02
MRPL39-201ENST00000307301 MPP6Q9NZW5 540 aa21.42■■□□□ 1.02
MRPL39-201ENST00000307301 IGLV3-10A0A075B6K4 115 aa21.41■■□□□ 1.02
MRPL39-201ENST00000307301 TTC34A8MYJ7 566 aa21.41■■□□□ 1.02
MRPL39-201ENST00000307301 DDX3XO00571 662 aaKnown RBP eCLIP21.41■■□□□ 1.026e-18■■■■■ 32.7
MRPL39-201ENST00000307301 SRGAP2O75044 1071 aa21.41■■□□□ 1.02
MRPL39-201ENST00000307301 ADRA1BP35368 520 aa21.41■■□□□ 1.02
MRPL39-201ENST00000307301 TPMTP51580 245 aa21.41■■□□□ 1.02
MRPL39-201ENST00000307301 HNRNPA1L2Q32P51 320 aaKnown RBP21.41■■□□□ 1.02
MRPL39-201ENST00000307301 SPDYCQ5MJ68 293 aa21.41■■□□□ 1.02
MRPL39-201ENST00000307301 RNF219Q5W0B1 726 aaPredicted RBP21.41■■□□□ 1.02
MRPL39-201ENST00000307301 PPP1R2P3Q6NXS1 205 aa21.41■■□□□ 1.02
MRPL39-201ENST00000307301 KDM1BQ8NB78 822 aa21.41■■□□□ 1.02
MRPL39-201ENST00000307301 CPLX3Q8WVH0 158 aa21.41■■□□□ 1.02
MRPL39-201ENST00000307301 VCPIP1Q96JH7 1222 aa21.41■■□□□ 1.02
MRPL39-201ENST00000307301 FEM1AQ9BSK4 669 aa21.41■■□□□ 1.02
MRPL39-201ENST00000307301 XPO4Q9C0E2 1151 aaKnown RBP21.41■■□□□ 1.02
MRPL39-201ENST00000307301 SLCO3A1Q9UIG8 710 aa21.41■■□□□ 1.02
MRPL39-201ENST00000307301 TBC1D30Q9Y2I9 924 aa21.41■■□□□ 1.02
MRPL39-201ENST00000307301 OR51B4Q9Y5P0 310 aa21.41■■□□□ 1.02
MRPL39-201ENST00000307301 ITIH6Q6UXX5 1313 aa21.4■■□□□ 1.02
MRPL39-201ENST00000307301 SPTBN4Q9H254 2564 aa21.4■■□□□ 1.02
MRPL39-201ENST00000307301 ANKRD62A6NC57 917 aa21.4■■□□□ 1.02
MRPL39-201ENST00000307301 PRR5-ARHGAP8B1AHC4 643 aa21.4■■□□□ 1.02
MRPL39-201ENST00000307301 CCP110O43303 1012 aa21.4■■□□□ 1.02
MRPL39-201ENST00000307301 ATMINO43313 823 aaPredicted RBP21.4■■□□□ 1.02
MRPL39-201ENST00000307301 SIN3BO75182 1162 aa21.4■■□□□ 1.02
MRPL39-201ENST00000307301 ACADMP11310 421 aa21.4■■□□□ 1.02
MRPL39-201ENST00000307301 CD6P30203 668 aa21.4■■□□□ 1.02
MRPL39-201ENST00000307301 ID4P47928 161 aa21.4■■□□□ 1.02
MRPL39-201ENST00000307301 ARHGAP8P85298 464 aa21.4■■□□□ 1.02
MRPL39-201ENST00000307301 RSPO4Q2I0M5 234 aaPredicted RBP21.4■■□□□ 1.02
MRPL39-201ENST00000307301 ARL13BQ3SXY8 428 aa21.4■■□□□ 1.02
MRPL39-201ENST00000307301 LYSMD4Q5XG99 296 aa21.4■■□□□ 1.02
MRPL39-201ENST00000307301 TCEAL6Q6IPX3 200 aa21.4■■□□□ 1.02
MRPL39-201ENST00000307301 TFAP2DQ7Z6R9 452 aa21.4■■□□□ 1.02
MRPL39-201ENST00000307301 CCDC185Q8N715 623 aa21.4■■□□□ 1.02
MRPL39-201ENST00000307301 C12orf50Q8NA57 414 aaPredicted RBP21.4■■□□□ 1.02
MRPL39-201ENST00000307301 PIGKQ92643 395 aa21.4■■□□□ 1.02
MRPL39-201ENST00000307301 TCEAL3Q969E4 200 aa21.4■■□□□ 1.02
MRPL39-201ENST00000307301 FBRSQ9HAH7 460 aa21.4■■□□□ 1.02
MRPL39-201ENST00000307301 CAPN11Q9UMQ6 739 aa21.4■■□□□ 1.02
MRPL39-201ENST00000307301 ATXN2Q99700 1313 aaKnown RBP21.39■■□□□ 1.01
MRPL39-201ENST00000307301 GDF9O60383 454 aa21.39■■□□□ 1.01
MRPL39-201ENST00000307301 FOXD2O60548 495 aaPredicted RBP21.39■■□□□ 1.01
MRPL39-201ENST00000307301 NDUFS2O75306 463 aa21.39■■□□□ 1.01
MRPL39-201ENST00000307301 RHOCP08134 193 aa21.39■■□□□ 1.01
MRPL39-201ENST00000307301 ZNF143P52747 638 aaPredicted RBP21.39■■□□□ 1.01
MRPL39-201ENST00000307301 RPS14P62263 151 aaKnown RBP21.39■■□□□ 1.01
MRPL39-201ENST00000307301 ZBED6P86452 979 aa21.39■■□□□ 1.01
MRPL39-201ENST00000307301 SULT2A1Q06520 285 aa21.39■■□□□ 1.01
MRPL39-201ENST00000307301 ARID5BQ14865 1188 aa21.39■■□□□ 1.01
MRPL39-201ENST00000307301 AASDHQ4L235 1098 aaPredicted RBP21.39■■□□□ 1.01
MRPL39-201ENST00000307301 HGSNATQ68CP4 663 aa21.39■■□□□ 1.01
MRPL39-201ENST00000307301 DCUN1D2Q6PH85 259 aa21.39■■□□□ 1.01
MRPL39-201ENST00000307301 SLC41A1Q8IVJ1 513 aa21.39■■□□□ 1.01
MRPL39-201ENST00000307301 TOE1Q96GM8 510 aaKnown RBP21.39■■□□□ 1.01
MRPL39-201ENST00000307301 PPP1R9BQ96SB3 815 aa21.39■■□□□ 1.01
MRPL39-201ENST00000307301 MAGEB5Q9BZ81 275 aa21.39■■□□□ 1.01
MRPL39-201ENST00000307301 MUC3BQ9H195 1237 aa21.39■■□□□ 1.01
MRPL39-201ENST00000307301 RXFP3Q9NSD7 469 aa21.39■■□□□ 1.01
MRPL39-201ENST00000307301 WSB2Q9NYS7 404 aaPredicted RBP21.39■■□□□ 1.01
MRPL39-201ENST00000307301 OR12D3Q9UGF7 316 aa21.39■■□□□ 1.01
MRPL39-201ENST00000307301 VPS28Q9UK41 221 aa21.39■■□□□ 1.01
MRPL39-201ENST00000307301 EDDM13A0A1B0GTR0 161 aa21.38■■□□□ 1.01
MRPL39-201ENST00000307301 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.38■■□□□ 1.01
MRPL39-201ENST00000307301 IGLV3-19P01714 112 aa21.38■■□□□ 1.01
MRPL39-201ENST00000307301 FTLP02792 175 aaPredicted RBP21.38■■□□□ 1.01
MRPL39-201ENST00000307301 GYPCP04921 128 aa21.38■■□□□ 1.01
MRPL39-201ENST00000307301 C7P10643 843 aa21.38■■□□□ 1.01
MRPL39-201ENST00000307301 GZMAP12544 262 aa21.38■■□□□ 1.01
MRPL39-201ENST00000307301 ITPKAP23677 461 aa21.38■■□□□ 1.01
MRPL39-201ENST00000307301 OGDHQ02218 1023 aa21.38■■□□□ 1.01
MRPL39-201ENST00000307301 ZNF33AQ06730 810 aa21.38■■□□□ 1.01
MRPL39-201ENST00000307301 MAMLD1Q13495 774 aa21.38■■□□□ 1.01
MRPL39-201ENST00000307301 TDRD12Q587J7 1177 aaKnown RBP21.38■■□□□ 1.01
MRPL39-201ENST00000307301 C9orf64Q5T6V5 341 aa21.38■■□□□ 1.01
MRPL39-201ENST00000307301 ZNF776Q68DI1 518 aaPredicted RBP21.38■■□□□ 1.01
MRPL39-201ENST00000307301 SETD3Q86TU7 594 aaPredicted RBP21.38■■□□□ 1.01
MRPL39-201ENST00000307301 RNF214Q8ND24 703 aa21.38■■□□□ 1.01
MRPL39-201ENST00000307301 SYN2Q92777 582 aaPredicted RBP21.38■■□□□ 1.01
MRPL39-201ENST00000307301 IQCDQ96DY2 449 aa21.38■■□□□ 1.01
MRPL39-201ENST00000307301 HSPA12BQ96MM6 686 aa21.38■■□□□ 1.01
MRPL39-201ENST00000307301 ZYG11BQ9C0D3 744 aa21.38■■□□□ 1.01
MRPL39-201ENST00000307301 RSPH9Q9H1X1 276 aaPredicted RBP21.38■■□□□ 1.01
MRPL39-201ENST00000307301 TMEM74BQ9NUR3 256 aa21.38■■□□□ 1.01
MRPL39-201ENST00000307301 PARVAQ9NVD7 372 aa21.38■■□□□ 1.01
MRPL39-201ENST00000307301 ZNF212Q9UDV6 495 aa21.38■■□□□ 1.01
MRPL39-201ENST00000307301 TARSL2A2RTX5 802 aaKnown RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms