RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 MTMR11A4FU01 709 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 OR6C75A6NL08 312 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 CCT8L1PA6NM43 557 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 CLGNO14967 610 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 TM9SF1O15321 606 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 EFEMP2O95967 443 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 CXCL10P02778 98 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 TUBP50607 506 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 MLLT6P55198 1093 aaPredicted RBP6.7□□□□□ -1.34
USP47-201ENST00000305481 MGAT5Q09328 741 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 NIPAL4Q0D2K0 466 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 CRYMQ14894 314 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 RASIP1Q5U651 963 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 ZNF280DQ6N043 979 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 CES3Q6UWW8 571 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 OTOP3Q7RTS5 596 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 SPATA21Q7Z572 469 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 PTPRN2Q92932 1015 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 ALKBH8Q96BT7 664 aaKnown RBP6.7□□□□□ -1.34
USP47-201ENST00000305481 TSGA13Q96PP4 275 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 FBXO44Q9H4M3 255 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 NOL6Q9H6R4 1146 aaKnown RBP6.7□□□□□ -1.34
USP47-201ENST00000305481 CASS4Q9NQ75 786 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 TRHDEQ9UKU6 1024 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 LRFN2Q9ULH4 789 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 USP15Q9Y4E8 981 aaPredicted RBP6.7□□□□□ -1.34
USP47-201ENST00000305481 PSAT1Q9Y617 370 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 TBKBP1A7MCY6 615 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 E9PAM4 449 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 DFFAO00273 331 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 ADAM12O43184 909 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 MTSS1O43312 755 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 CACNG3O60359 315 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 LPXNO60711 386 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 KIAA0754O94854 1291 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 SNRPAP09012 282 aaKnown RBP6.7□□□□□ -1.34
USP47-201ENST00000305481 PGAM1P18669 254 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 GPR17Q13304 367 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 ARHGEF6Q15052 776 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 HHATQ5VTY9 493 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 PRSS55Q6UWB4 352 aaPredicted RBP6.7□□□□□ -1.34
USP47-201ENST00000305481 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.7□□□□□ -1.34
USP47-201ENST00000305481 KLHDC8BQ8IXV7 354 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 ZNF75CPQ92670 426 aaPredicted RBP6.7□□□□□ -1.34
USP47-201ENST00000305481 APBB2Q92870 758 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 TTC17Q96AE7 1141 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 APOPT1Q96IL0 206 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 C1orf74Q96LT6 269 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 SERPINB11Q96P15 392 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 VN1R3Q9BXE9 311 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 PITPNM3Q9BZ71 974 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 ABCF3Q9NUQ8 709 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 SAGE1Q9NXZ1 904 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 UBP1Q9NZI7 540 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 GGT7Q9UJ14 662 aa6.7□□□□□ -1.34
USP47-201ENST00000305481 FNDC1Q4ZHG4 1894 aaPredicted RBP6.7□□□□□ -1.34
USP47-201ENST00000305481 GREB1Q4ZG55 1949 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 GOLGA6L7A0A1B0GV03 622 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 WDR91A4D1P6 747 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 ARHGAP42A6NI28 874 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 KRT37O76014 449 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 CCNB1P14635 433 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 CPB1P15086 417 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 CCNCP24863 283 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 YWHAQP27348 245 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 MAGEA9P43362 315 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 NRG1Q02297 640 aaPredicted RBP6.69□□□□□ -1.34
USP47-201ENST00000305481 ZNF33AQ06730 810 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 TAF10Q12962 218 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 SMAD1Q15797 465 aaKnown RBP6.69□□□□□ -1.34
USP47-201ENST00000305481 LACTB2Q53H82 288 aaPredicted RBP6.69□□□□□ -1.34
USP47-201ENST00000305481 MROH9Q5TGP6 573 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 CCDC121Q6ZUS5 278 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 ANKRD33Q7Z3H0 272 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 ANKS4BQ8N8V4 417 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 USP33Q8TEY7 942 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 TBC1D31Q96DN5 1066 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 FAM111AQ96PZ2 611 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 VAT1Q99536 393 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 APOL2Q9BQE5 337 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 KDM4CQ9H3R0 1056 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 HIPK3Q9H422 1215 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 ALG13Q9NP73 1137 aaKnown RBP6.69□□□□□ -1.34
USP47-201ENST00000305481 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.69□□□□□ -1.34
USP47-201ENST00000305481 PHTF1Q9UMS5 762 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 NYNRINQ9P2P1 1898 aaKnown RBP6.69□□□□□ -1.34
USP47-201ENST00000305481 FGF10O15520 208 aaPredicted RBP6.69□□□□□ -1.34
USP47-201ENST00000305481 EDF1O60869 148 aaKnown RBP6.69□□□□□ -1.34
USP47-201ENST00000305481 ZNF189O75820 626 aaPredicted RBP6.69□□□□□ -1.34
USP47-201ENST00000305481 HAPLN1P10915 354 aaPredicted RBP6.69□□□□□ -1.34
USP47-201ENST00000305481 CCL5P13501 91 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 ATF6P18850 670 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 GBP2P32456 591 aaPredicted RBP6.69□□□□□ -1.34
USP47-201ENST00000305481 HTR7P34969 479 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 EFEMP1Q12805 493 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 DUSP4Q13115 394 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 MS4A13Q5J8X5 152 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 CERCAMQ5T4B2 595 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 MARK2Q7KZI7 788 aaKnown RBP6.69□□□□□ -1.34
USP47-201ENST00000305481 TRPM8Q7Z2W7 1104 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms