RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 ZNF276Q8N554 614 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.08□□□□□ -0.32
COL3A1-201ENST00000304636 MAGEE2Q8TD90 523 aaPredicted RBP13.08□□□□□ -0.32
COL3A1-201ENST00000304636 ACOX2Q99424 681 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 FHDC1Q9C0D6 1143 aaPredicted RBP13.08□□□□□ -0.32
COL3A1-201ENST00000304636 HSD3B7Q9H2F3 369 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 ELOVL6Q9H5J4 265 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 S100A14Q9HCY8 104 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 RAP2CQ9Y3L5 183 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 DCDC2CA8MYV0 355 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 WNT7AO00755 349 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 HDAC3O15379 428 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 SYNCRIPO60506 623 aaKnown RBP13.08□□□□□ -0.32
COL3A1-201ENST00000304636 ALDH1A1P00352 501 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 KRT6AP02538 564 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 KRT6BP04259 564 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 ETS2P15036 469 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 KRT6CP48668 564 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 ZNF135P52742 658 aaPredicted RBP13.08□□□□□ -0.32
COL3A1-201ENST00000304636 TNK2Q07912 1038 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 SFSWAPQ12872 951 aaKnown RBP13.08□□□□□ -0.32
COL3A1-201ENST00000304636 NPNTQ6UXI9 565 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 LZTR1Q8N653 840 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 CERS2Q96G23 380 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 COQ7Q99807 217 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 DGCR6LQ9BY27 220 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 TTYH3Q9C0H2 523 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 DEFB129Q9H1M3 183 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 CLK4Q9HAZ1 481 aaKnown RBP13.08□□□□□ -0.32
COL3A1-201ENST00000304636 AGLP35573 1532 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 TRUB2O95900 331 aaKnown RBP13.08□□□□□ -0.32
COL3A1-201ENST00000304636 C6orf222P0C671 652 aaPredicted RBP13.08□□□□□ -0.32
COL3A1-201ENST00000304636 TAL1P17542 331 aaPredicted RBP13.08□□□□□ -0.32
COL3A1-201ENST00000304636 NAGLUP54802 743 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 FUT2Q10981 343 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 PDZK1Q5T2W1 519 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 MARC1Q5VT66 337 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 METTL7BQ6UX53 244 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 PSTKQ8IV42 348 aaKnown RBP13.08□□□□□ -0.32
COL3A1-201ENST00000304636 RDH11Q8TC12 318 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 NMRK2Q9NPI5 230 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 DIABLOQ9NR28 239 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 ABI2Q9NYB9 513 aaPredicted RBP13.08□□□□□ -0.32
COL3A1-201ENST00000304636 MORF4L1Q9UBU8 362 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 DUSP12Q9UNI6 340 aa13.08□□□□□ -0.32
COL3A1-201ENST00000304636 TCRBV9S1A1TA0A576 114 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 E5RJQ4 531 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 KCNK1O00180 336 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 PARNO95453 639 aaKnown RBP13.07□□□□□ -0.32
COL3A1-201ENST00000304636 IRF1P10914 325 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 ITGALP20701 1170 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 TALDO1P37837 337 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 IL12RB1P42701 662 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 RNF220Q5VTB9 566 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 ZNF572Q7Z3I7 529 aaPredicted RBP13.07□□□□□ -0.32
COL3A1-201ENST00000304636 NT5DC4Q86YG4 428 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 DNERQ8NFT8 737 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 CELF6Q96J87 481 aaKnown RBP13.07□□□□□ -0.32
COL3A1-201ENST00000304636 EBNA1BP2Q99848 306 aaKnown RBP13.07□□□□□ -0.32
COL3A1-201ENST00000304636 PRRG3Q9BZD7 231 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 RIBC2Q9H4K1 309 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 TIMMDC1Q9NPL8 285 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 DPPA5A6NC42 116 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 KRT87PA6NCN2 255 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 MAGEC1O60732 1142 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 TGDSO95455 350 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 GUCA1CO95843 209 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 SP100P23497 879 aaPredicted RBP13.07□□□□□ -0.32
COL3A1-201ENST00000304636 ADSSP30520 456 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 TMEM63BQ5T3F8 832 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 TTC30AQ86WT1 665 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 KRT73Q86Y46 540 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 ADHFE1Q8IWW8 467 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 SFRP1Q8N474 314 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 GSTCDQ8NEC7 633 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 UTP15Q8TED0 518 aaKnown RBP13.07□□□□□ -0.32
COL3A1-201ENST00000304636 RTKNQ9BST9 563 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 LRRC4CQ9HCJ2 640 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 TAS2R13Q9NYV9 303 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 SLC17A7Q9P2U7 560 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 VIRMAQ69YN4 1812 aaKnown RBP13.07□□□□□ -0.32
COL3A1-201ENST00000304636 TMEM150BA6NC51 233 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 TM7SF2O76062 418 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 ANXA6P08133 673 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 LBPP18428 481 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 RENBPP51606 427 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 OXCT1P55809 520 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 BACE1P56817 501 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 NOMO3P69849 1222 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 LRRC57Q8N9N7 239 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 OR7A2PQ8NGA2 310 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 RNF157Q96PX1 679 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 SLC4A5Q9BY07 1137 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 RAD21L1Q9H4I0 556 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 MGAT4DA6NG13 374 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 PRR5-ARHGAP8B1AHC4 643 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 GRIA4P48058 902 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 CCNHP51946 323 aaPredicted RBP13.07□□□□□ -0.32
COL3A1-201ENST00000304636 CDH8P55286 799 aa13.07□□□□□ -0.32
COL3A1-201ENST00000304636 ARHGAP8P85298 464 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms