RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 NR2E3Q9Y5X4 410 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 IKBKGQ9Y6K9 419 aa10.86□□□□□ -0.67
CLP1-201ENST00000302731 IQANK1A0A1B0GTG1 560 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 FAM47DPA6NHR8 397 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 DRGXA6NNA5 263 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 NDUFAB1O14561 156 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 MATN3O15232 486 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 ZBTB24O43167 697 aaPredicted RBP10.85□□□□□ -0.67
CLP1-201ENST00000302731 MAFKO60675 156 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 ALDH1A2O94788 518 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 MOCS2O96007 188 aaPredicted RBP10.85□□□□□ -0.67
CLP1-201ENST00000302731 CSF2RAP15509 400 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 CD68P34810 354 aaPredicted RBP10.85□□□□□ -0.67
CLP1-201ENST00000302731 PPP3CCP48454 512 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 IFNAR2P48551 515 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 DEFB103AP81534 67 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 CREMQ03060 361 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 ZBTB17Q13105 803 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 RAB33AQ14088 237 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 PRPSAP1Q14558 356 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 KBTBD12Q3ZCT8 623 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 SYCP2LQ5T4T6 812 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 UNC5AQ6ZN44 842 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 C14orf80Q86SX3 495 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 SLC26A11Q86WA9 606 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 LRRC6Q86X45 466 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 NETO2Q8NC67 525 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 TTC17Q96AE7 1141 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 STAMBPL1Q96FJ0 436 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 TRMT2BQ96GJ1 504 aaKnown RBP10.85□□□□□ -0.67
CLP1-201ENST00000302731 SMC6Q96SB8 1091 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 CCT8L2Q96SF2 557 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 IL12RB2Q99665 862 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 SLC39A8Q9C0K1 460 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 TRABDQ9H4I3 376 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 PLAC1Q9HBJ0 212 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 PPANQ9NQ55 473 aaKnown RBP10.85□□□□□ -0.67
CLP1-201ENST00000302731 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.85□□□□□ -0.67
CLP1-201ENST00000302731 NKIRAS1Q9NYS0 192 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 MOCS1Q9NZB8 636 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 DNMT3LQ9UJW3 386 aa10.85□□□□□ -0.67
CLP1-201ENST00000302731 SLC12A8A0AV02 714 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 ARHGAP42A6NI28 874 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 FAM159BA6NKW6 160 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 TBX18O95935 607 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 JCHAINP01591 159 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 URODP06132 367 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 INHBAP08476 426 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 HSPA8P11142 646 aaKnown RBP10.84□□□□□ -0.67
CLP1-201ENST00000302731 CCNB1P14635 433 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 CREB1P16220 341 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 PGAM1P18669 254 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 ITGB8P26012 769 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 ATP5C1P36542 298 aaKnown RBP10.84□□□□□ -0.67
CLP1-201ENST00000302731 GRIA1P42261 906 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 MTM1Q13496 603 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 NAB1Q13506 487 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 FRG1Q14331 258 aaKnown RBP10.84□□□□□ -0.67
CLP1-201ENST00000302731 ANO4Q32M45 955 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 C5orf22Q49AR2 442 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 LGSNQ5TDP6 509 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 ARMC3Q5W041 872 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 SPATS2Q86XZ4 545 aaKnown RBP10.84□□□□□ -0.67
CLP1-201ENST00000302731 GIPC2Q8TF65 315 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 MZB1Q8WU39 189 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 AZIN2Q96A70 460 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 CHMP6Q96FZ7 201 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 CFAP36Q96G28 342 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 CELF6Q96J87 481 aaKnown RBP10.84□□□□□ -0.67
CLP1-201ENST00000302731 ZNF317Q96PQ6 595 aaPredicted RBP10.84□□□□□ -0.67
CLP1-201ENST00000302731 FCRL5Q96RD9 977 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 PRMT1Q99873 361 aaKnown RBP10.84□□□□□ -0.67
CLP1-201ENST00000302731 GORASP1Q9BQQ3 440 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 LRRC40Q9H9A6 602 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 KCNK9Q9NPC2 374 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 CASS4Q9NQ75 786 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 AAR2Q9Y312 384 aaKnown RBP10.84□□□□□ -0.67
CLP1-201ENST00000302731 MAD1L1Q9Y6D9 718 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 MRPL42Q9Y6G3 142 aaKnown RBP10.84□□□□□ -0.67
CLP1-201ENST00000302731 BRCA2P51587 3418 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 MAGEB16A2A368 324 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 ZNF840PA6NDX5 716 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 DFFAO00273 331 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 SEC24AO95486 1093 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 HMGA1P17096 107 aaKnown RBP10.84□□□□□ -0.67
CLP1-201ENST00000302731 RPL17P18621 184 aaKnown RBP10.84□□□□□ -0.67
CLP1-201ENST00000302731 GBP2P32456 591 aaPredicted RBP10.84□□□□□ -0.67
CLP1-201ENST00000302731 ALDH1A3P47895 512 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 MAPKAPK2P49137 400 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 NPY2RP49146 381 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 SEC24CP53992 1094 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 TNK2Q07912 1038 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 EFTUD2Q15029 972 aaKnown RBP eCLIP10.84□□□□□ -0.67
CLP1-201ENST00000302731 HECTD3Q5T447 861 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 NAPEPLDQ6IQ20 393 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 FBXL22Q6P050 247 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 LINC00523Q86TU6 105 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 MIB1Q86YT6 1006 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 MPP5Q8N3R9 675 aa10.84□□□□□ -0.67
CLP1-201ENST00000302731 CNTD1Q8N815 330 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms