RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 NEDD8-MDP1E9PL57 170 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 FGF10O15520 208 aaPredicted RBP9.74□□□□□ -0.85
RFX3-201ENST00000302303 CEP104O60308 925 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 TULP3O75386 442 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 ZMPSTE24O75844 475 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 MAP3K6O95382 1288 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 NFATC1O95644 943 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 CD160O95971 181 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 PEX11BO96011 259 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 TUBB4AP04350 444 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 ADH5P11766 374 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 TCP1P17987 556 aaKnown RBP9.74□□□□□ -0.85
RFX3-201ENST00000302303 CD70P32970 193 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 ACVRL1P37023 503 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 GAD2Q05329 585 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 LMAN2Q12907 356 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 GEN1Q17RS7 908 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 ANO4Q32M45 955 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 ITPRIPL2Q3MIP1 535 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 RABGAP1LQ5R372 815 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 FAM182AQ5T1J6 154 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 ZFYVE27Q5T4F4 411 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 TTC39BQ5VTQ0 682 aaPredicted RBP9.74□□□□□ -0.85
RFX3-201ENST00000302303 TXNDC11Q6PKC3 985 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 ARHGAP36Q6ZRI8 547 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 SETD3Q86TU7 594 aaPredicted RBP9.74□□□□□ -0.85
RFX3-201ENST00000302303 RNF135Q8IUD6 432 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 CCDC50Q8IVM0 306 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 APCDD1Q8J025 514 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 CCDC33Q8N5R6 958 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.74□□□□□ -0.85
RFX3-201ENST00000302303 PRELID2Q8N945 189 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 LRRN4Q8WUT4 740 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 ARHGEF2Q92974 986 aaKnown RBP9.74□□□□□ -0.85
RFX3-201ENST00000302303 NECAB3Q96P71 396 aaPredicted RBP9.74□□□□□ -0.85
RFX3-201ENST00000302303 OLFM3Q96PB7 478 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 FEM1AQ9BSK4 669 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 ACE2Q9BYF1 805 aaPredicted RBP9.74□□□□□ -0.85
RFX3-201ENST00000302303 BRD9Q9H8M2 597 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 SLC2A4RGQ9NR83 387 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 TICRRQ7Z2Z1 1910 aa9.74□□□□□ -0.85
RFX3-201ENST00000302303 A0A0A0MRY4 1105 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 ILVBLA1L0T0 632 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 PRRT4C9JH25 899 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 KIF2AO00139 706 aaPredicted RBP9.73□□□□□ -0.85
RFX3-201ENST00000302303 FGGP02679 453 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 SRFP11831 508 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 GLDCP23378 1020 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 OR1E1P30953 314 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 MAPKAPK2P49137 400 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 NUMBP49757 651 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 NDST2P52849 883 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 PLK1P53350 603 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 DYNLT1P63172 113 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 C1orf228Q6PIY5 440 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 TMCO3Q6UWJ1 677 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 B4GALNT4Q76KP1 1039 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 ADAT2Q7Z6V5 191 aaKnown RBP9.73□□□□□ -0.85
RFX3-201ENST00000302303 ADIPOR2Q86V24 386 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 RFX6Q8HWS3 928 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 YAF2Q8IY57 180 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 ZNF687Q8N1G0 1237 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 CARNMT1Q8N4J0 409 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 OR7D4Q8NG98 312 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 SLC35B2Q8TB61 432 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 HMCESQ96FZ2 354 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 ZNF419Q96HQ0 510 aaPredicted RBP9.73□□□□□ -0.85
RFX3-201ENST00000302303 CELF6Q96J87 481 aaKnown RBP9.73□□□□□ -0.85
RFX3-201ENST00000302303 FAM118BQ9BPY3 351 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 SLC2A11Q9BYW1 496 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 CATSPERBQ9H7T0 1116 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 PRDM16Q9HAZ2 1276 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 HEBP1Q9NRV9 189 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 DUSP12Q9UNI6 340 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 SLC27A6Q9Y2P4 619 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 ACTL7AQ9Y615 435 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 NUP205Q92621 2012 aa9.73□□□□□ -0.85
RFX3-201ENST00000302303 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.72□□□□□ -0.85
RFX3-201ENST00000302303 RASA4BC9J798 803 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 APOC4-APOC2K7ER74 178 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 APOL1O14791 398 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 DAPK3O43293 454 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 RASA4O43374 803 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 MAFKO60675 156 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 ADH1CP00326 375 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 APOC2P02655 101 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 CYBBP04839 570 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 CSKP41240 450 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 PAPOLAP51003 745 aaKnown RBP9.72□□□□□ -0.85
RFX3-201ENST00000302303 GALK1P51570 392 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 YBEYP58557 167 aaPredicted RBP9.72□□□□□ -0.85
RFX3-201ENST00000302303 OTUD4Q01804 1114 aaKnown RBP9.72□□□□□ -0.85
RFX3-201ENST00000302303 GNA12Q03113 381 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 GALNT2Q10471 571 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 ZNF177Q13360 481 aaPredicted RBP9.72□□□□□ -0.85
RFX3-201ENST00000302303 SERINC3Q13530 473 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 TFDP2Q14188 446 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 NOMO1Q15155 1222 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 CYP1B1Q16678 543 aa9.72□□□□□ -0.85
RFX3-201ENST00000302303 KCTD19Q17RG1 926 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms