RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ZNF395Q9H8N7 513 aaPredicted RBP22.46■■□□□ 1.19
TPM4-201ENST00000300933 PNPLA8Q9NP80 782 aa22.46■■□□□ 1.19
TPM4-201ENST00000300933 RCOR3Q9P2K3 495 aaPredicted RBP22.46■■□□□ 1.19
TPM4-201ENST00000300933 PSAT1Q9Y617 370 aa22.46■■□□□ 1.19
TPM4-201ENST00000300933 TSC2P49815 1807 aa22.46■■□□□ 1.19
TPM4-201ENST00000300933 ZBTB24O43167 697 aaPredicted RBP22.46■■□□□ 1.19
TPM4-201ENST00000300933 TSHRP16473 764 aa22.46■■□□□ 1.19
TPM4-201ENST00000300933 GRIK1P39086 918 aa22.46■■□□□ 1.19
TPM4-201ENST00000300933 ACLYP53396 1101 aa22.46■■□□□ 1.19
TPM4-201ENST00000300933 SLC18A1P54219 525 aa22.46■■□□□ 1.19
TPM4-201ENST00000300933 MFN1Q8IWA4 741 aa22.46■■□□□ 1.19
TPM4-201ENST00000300933 FAM136AQ96C01 138 aa22.46■■□□□ 1.19
TPM4-201ENST00000300933 CADM1Q9BY67 442 aaKnown RBP22.46■■□□□ 1.19
TPM4-201ENST00000300933 STOML1Q9UBI4 398 aa22.46■■□□□ 1.19
TPM4-201ENST00000300933 TDRD15B5MCY1 1934 aaKnown RBP22.46■■□□□ 1.19
TPM4-201ENST00000300933 CCDC195A0A1B0GUA6 201 aa22.45■■□□□ 1.19
TPM4-201ENST00000300933 HACD1B0YJ81 288 aa22.45■■□□□ 1.19
TPM4-201ENST00000300933 COPEO14579 308 aa22.45■■□□□ 1.19
TPM4-201ENST00000300933 SPAG6O75602 509 aa22.45■■□□□ 1.19
TPM4-201ENST00000300933 RFPL1O75677 317 aa22.45■■□□□ 1.19
TPM4-201ENST00000300933 SNRPAP09012 282 aaKnown RBP22.45■■□□□ 1.19
TPM4-201ENST00000300933 PTPN3P26045 913 aa22.45■■□□□ 1.19
TPM4-201ENST00000300933 PAFAH1B3Q15102 231 aaKnown RBP22.45■■□□□ 1.19
TPM4-201ENST00000300933 ARHGAP36Q6ZRI8 547 aa22.45■■□□□ 1.19
TPM4-201ENST00000300933 CLNKQ7Z7G1 428 aa22.45■■□□□ 1.19
TPM4-201ENST00000300933 GALNT15Q8N3T1 639 aa22.45■■□□□ 1.19
TPM4-201ENST00000300933 RFWD2Q8NHY2 731 aa22.45■■□□□ 1.19
TPM4-201ENST00000300933 DQX1Q8TE96 717 aaKnown RBP22.45■■□□□ 1.19
TPM4-201ENST00000300933 ARNTL2Q8WYA1 636 aa22.45■■□□□ 1.19
TPM4-201ENST00000300933 APOPT1Q96IL0 206 aa22.45■■□□□ 1.19
TPM4-201ENST00000300933 VCXQ9H320 206 aa22.45■■□□□ 1.19
TPM4-201ENST00000300933 MANSC1Q9H8J5 431 aa22.45■■□□□ 1.19
TPM4-201ENST00000300933 CSNK1G1Q9HCP0 422 aa22.45■■□□□ 1.19
TPM4-201ENST00000300933 DNAJB4Q9UDY4 337 aa22.45■■□□□ 1.19
TPM4-201ENST00000300933 PCDHA11Q9Y5I1 949 aa22.45■■□□□ 1.19
TPM4-201ENST00000300933 STK10O94804 968 aaKnown RBP22.45■■□□□ 1.18
TPM4-201ENST00000300933 VHLP40337 213 aa22.45■■□□□ 1.18
TPM4-201ENST00000300933 GPR15P49685 360 aa22.45■■□□□ 1.18
TPM4-201ENST00000300933 ZBTB17Q13105 803 aa22.45■■□□□ 1.18
TPM4-201ENST00000300933 SEMA3BQ13214 749 aa22.45■■□□□ 1.18
TPM4-201ENST00000300933 KPNB1Q14974 876 aaKnown RBP22.45■■□□□ 1.18
TPM4-201ENST00000300933 PSTKQ8IV42 348 aaKnown RBP22.45■■□□□ 1.18
TPM4-201ENST00000300933 ATXN7L3BQ96GX2 97 aa22.45■■□□□ 1.18
TPM4-201ENST00000300933 GORASP1Q9BQQ3 440 aa22.45■■□□□ 1.18
TPM4-201ENST00000300933 XAB2Q9HCS7 855 aaKnown RBP22.45■■□□□ 1.18
TPM4-201ENST00000300933 DMAP1Q9NPF5 467 aaPredicted RBP22.45■■□□□ 1.18
TPM4-201ENST00000300933 ABI2Q9NYB9 513 aaPredicted RBP22.45■■□□□ 1.18
TPM4-201ENST00000300933 KRT37O76014 449 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 MOCS2O96007 188 aaPredicted RBP22.44■■□□□ 1.18
TPM4-201ENST00000300933 ERVK-10P10266 1014 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 TPH1P17752 444 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 ETV4P43268 484 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 GLUD2P49448 558 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 ERFP50548 548 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 NEK3P51956 506 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 TRIM71Q2Q1W2 868 aaKnown RBP22.44■■□□□ 1.18
TPM4-201ENST00000300933 SLC39A12Q504Y0 691 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 FRMD8Q9BZ67 464 aaPredicted RBP22.44■■□□□ 1.18
TPM4-201ENST00000300933 A0A0G2JND7 137 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 SDR42E2A6NKP2 422 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 OPHN1O60890 802 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 CKBP12277 381 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 ABCG1P45844 678 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 OR1G1P47890 313 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 RPS6KA3P51812 740 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 SP3Q02447 781 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 OR52E8Q6IFG1 317 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 IQCGQ9H095 443 aaKnown RBP22.44■■□□□ 1.18
TPM4-201ENST00000300933 SCOCQ9UIL1 159 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 A0A1B0GVG6 124 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 FAM163BP0C2L3 166 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 FDFT1P37268 417 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 SLC18A2Q05940 514 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 DDR2Q16832 855 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 ARL13BQ3SXY8 428 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 NDUFAF2Q8N183 169 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 CD99L2Q8TCZ2 262 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 HCSTQ9UBK5 93 aa22.44■■□□□ 1.18
TPM4-201ENST00000300933 FAM159BA6NKW6 160 aa22.43■■□□□ 1.18
TPM4-201ENST00000300933 TRDMT1O14717 391 aaKnown RBP22.43■■□□□ 1.18
TPM4-201ENST00000300933 TM9SF1O15321 606 aa22.43■■□□□ 1.18
TPM4-201ENST00000300933 TRPA1O75762 1119 aa22.43■■□□□ 1.18
TPM4-201ENST00000300933 SLC5A3P53794 718 aa22.43■■□□□ 1.18
TPM4-201ENST00000300933 ACSBG2Q5FVE4 666 aa22.43■■□□□ 1.18
TPM4-201ENST00000300933 FOXB2Q5VYV0 432 aa22.43■■□□□ 1.18
TPM4-201ENST00000300933 PKMYT1Q99640 499 aa22.43■■□□□ 1.18
TPM4-201ENST00000300933 TRIM4Q9C037 500 aa22.43■■□□□ 1.18
TPM4-201ENST00000300933 SSU72Q9NP77 194 aaKnown RBP22.43■■□□□ 1.18
TPM4-201ENST00000300933 JCHAINP01591 159 aa22.43■■□□□ 1.18
TPM4-201ENST00000300933 CD68P34810 354 aaPredicted RBP22.43■■□□□ 1.18
TPM4-201ENST00000300933 CXCR3P49682 368 aa22.43■■□□□ 1.18
TPM4-201ENST00000300933 YWHAHQ04917 246 aaPredicted RBP22.43■■□□□ 1.18
TPM4-201ENST00000300933 CMPK2Q5EBM0 449 aa22.43■■□□□ 1.18
TPM4-201ENST00000300933 CLLU1OSQ5K130 101 aa22.43■■□□□ 1.18
TPM4-201ENST00000300933 IRGCQ6NXR0 463 aa22.43■■□□□ 1.18
TPM4-201ENST00000300933 C4orf22Q6V702 233 aa22.43■■□□□ 1.18
TPM4-201ENST00000300933 ALKBH8Q96BT7 664 aaKnown RBP22.43■■□□□ 1.18
TPM4-201ENST00000300933 LRRC39Q96DD0 335 aa22.43■■□□□ 1.18
TPM4-201ENST00000300933 ARL8BQ9NVJ2 186 aa22.43■■□□□ 1.18
TPM4-201ENST00000300933 C9IYK1 514 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms