RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 PPP2R5DQ14738 602 aa13.21□□□□□ -0.29
HIF3A-204ENST00000300862 CERCAMQ5T4B2 595 aa13.21□□□□□ -0.29
HIF3A-204ENST00000300862 OLFML2BQ68BL8 750 aa13.21□□□□□ -0.29
HIF3A-204ENST00000300862 WDR75Q8IWA0 830 aaKnown RBP13.21□□□□□ -0.29
HIF3A-204ENST00000300862 SCUBE1Q8IWY4 988 aa13.21□□□□□ -0.29
HIF3A-204ENST00000300862 AGR3Q8TD06 166 aa13.21□□□□□ -0.29
HIF3A-204ENST00000300862 SCG3Q8WXD2 468 aaKnown RBP13.21□□□□□ -0.29
HIF3A-204ENST00000300862 NT5C3BQ969T7 300 aa13.21□□□□□ -0.29
HIF3A-204ENST00000300862 MFSD3Q96ES6 412 aa13.21□□□□□ -0.29
HIF3A-204ENST00000300862 CERS2Q96G23 380 aa13.21□□□□□ -0.29
HIF3A-204ENST00000300862 MYBPHLA2RUH7 354 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 ZBTB24O43167 697 aaPredicted RBP13.21□□□□□ -0.3
HIF3A-204ENST00000300862 PROCP04070 461 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 POLBP06746 335 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 SERPINA6P08185 405 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 NCAM1P13591 858 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 PTPN3P26045 913 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 ADRA1BP35368 520 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 SLC25A3Q00325 362 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 SLC34A1Q06495 639 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 TUBB3Q13509 450 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 PEX6Q13608 980 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 FAM91A1Q658Y4 838 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 DPY19L2Q6NUT2 758 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 LRRC74BQ6ZQY2 392 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 CYS1Q717R9 158 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 PLEKHH3Q7Z736 793 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 TLK2Q86UE8 772 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 ULK2Q8IYT8 1036 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 DCLK2Q8N568 766 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 ACVR1CQ8NER5 493 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 ZFAND2BQ8WV99 257 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 ATP2A3Q93084 1043 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 SORT1Q99523 831 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 CRTAC1Q9NQ79 661 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 SNX15Q9NRS6 342 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 DDX43Q9NXZ2 648 aaKnown RBP13.21□□□□□ -0.3
HIF3A-204ENST00000300862 RCOR3Q9P2K3 495 aaPredicted RBP13.21□□□□□ -0.3
HIF3A-204ENST00000300862 SLC7A8Q9UHI5 535 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 STAP1Q9ULZ2 295 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 PLA2G4CQ9UP65 541 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 CLEC11AQ9Y240 323 aa13.21□□□□□ -0.3
HIF3A-204ENST00000300862 BPTFQ12830 3046 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 MYL3P08590 195 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 RPS6KA3P51812 740 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 IRF9Q00978 393 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 HSP90AA5PQ58FG0 334 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 RIPOR1Q6ZS17 1223 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 LIMS2Q7Z4I7 341 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 STRA8Q7Z7C7 330 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 KBTBD2Q8IY47 623 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 CFAP61Q8NHU2 1237 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 PANX3Q96QZ0 392 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 VCXQ9H320 206 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 MMADHCQ9H3L0 296 aaPredicted RBP13.2□□□□□ -0.3
HIF3A-204ENST00000300862 EIF2B3Q9NR50 452 aaKnown RBP13.2□□□□□ -0.3
HIF3A-204ENST00000300862 DDIT4Q9NX09 232 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 FLRT1Q9NZU1 646 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 DCDC2Q9UHG0 476 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 XPOTO43592 962 aaKnown RBP13.2□□□□□ -0.3
HIF3A-204ENST00000300862 SORBS2O94875 1100 aaKnown RBP13.2□□□□□ -0.3
HIF3A-204ENST00000300862 FAM200BP0CF97 657 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 WARSP23381 471 aaKnown RBP13.2□□□□□ -0.3
HIF3A-204ENST00000300862 GP5P40197 560 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 TPI1P60174 286 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 USP4Q13107 963 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 PAFAH1B3Q15102 231 aaKnown RBP13.2□□□□□ -0.3
HIF3A-204ENST00000300862 RAB3IL1Q8TBN0 382 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 ACMSDQ8TDX5 336 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 ZC3H15Q8WU90 426 aaKnown RBP13.2□□□□□ -0.3
HIF3A-204ENST00000300862 GTF3C2Q8WUA4 911 aaPredicted RBP13.2□□□□□ -0.3
HIF3A-204ENST00000300862 CELF6Q96J87 481 aaKnown RBP13.2□□□□□ -0.3
HIF3A-204ENST00000300862 PTPN18Q99952 460 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 FERMT1Q9BQL6 677 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 WDR6Q9NNW5 1121 aaKnown RBP13.2□□□□□ -0.3
HIF3A-204ENST00000300862 MAN1C1Q9NR34 630 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 COPG2Q9UBF2 871 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 VANGL2Q9ULK5 521 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 RALGAPA2Q2PPJ7 1873 aa13.2□□□□□ -0.3
HIF3A-204ENST00000300862 RTN3O95197 1032 aaPredicted RBP13.19□□□□□ -0.3
HIF3A-204ENST00000300862 SERPINE1P05121 402 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 SAT1P21673 171 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 RAP1GDS1P52306 607 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 ZBTB17Q13105 803 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 XKR4Q5GH76 650 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 RALGPS1Q5JS13 557 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 FSTL4Q6MZW2 842 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 BNIPLQ7Z465 357 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 ARHGAP24Q8N264 748 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 LPPQ93052 612 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 SLC2A13Q96QE2 648 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 SMOQ99835 787 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 CHRAC1Q9NRG0 131 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 STX18Q9P2W9 335 aaKnown RBP13.19□□□□□ -0.3
HIF3A-204ENST00000300862 CPA4Q9UI42 421 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 SCOCQ9UIL1 159 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 GNEQ9Y223 722 aaKnown RBP13.19□□□□□ -0.3
HIF3A-204ENST00000300862 LOC100653049A0A140TA62 436 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 ZMPSTE24O75844 475 aa13.19□□□□□ -0.3
HIF3A-204ENST00000300862 KRT34O76011 436 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms