RNA–Protein interactions for RNA: ENST00000299855.9

MMP3-201, Transcript of matrix metallopeptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP3, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3-201ENST00000299855 TJP3O95049 919 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 LRG1P02750 347 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 NR3C1P04150 777 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 DLDP09622 509 aaKnown RBP9.35□□□□□ -0.91
MMP3-201ENST00000299855 FOXN2P32314 431 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 ACAA2P42765 397 aaKnown RBP9.35□□□□□ -0.91
MMP3-201ENST00000299855 CACNA2D1P54289 1103 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 POLE2P56282 527 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 MAP3K7CLP57077 242 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 STARD6P59095 220 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 MYL6P60660 151 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 EFR3AQ14156 821 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 CCDC6Q16204 474 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 TOR1AIP1Q5JTV8 583 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 UBXN11Q5T124 520 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 TCERG1LQ5VWI1 586 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 IZUMO3Q5VZ72 239 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 TWF2Q6IBS0 349 aaKnown RBP9.35□□□□□ -0.91
MMP3-201ENST00000299855 PAPD4Q6PIY7 484 aaKnown RBP9.35□□□□□ -0.91
MMP3-201ENST00000299855 PRPF39Q86UA1 669 aaKnown RBP9.35□□□□□ -0.91
MMP3-201ENST00000299855 SYT2Q8N9I0 419 aaPredicted RBP9.35□□□□□ -0.91
MMP3-201ENST00000299855 STKLD1Q8NE28 680 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 SHCBP1Q8NEM2 672 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 SH3RF3Q8TEJ3 882 aaPredicted RBP9.35□□□□□ -0.91
MMP3-201ENST00000299855 BCL7CQ8WUZ0 217 aaPredicted RBP9.35□□□□□ -0.91
MMP3-201ENST00000299855 LZICQ8WZA0 190 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 NXPE3Q969Y0 559 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 ARHGEF26Q96DR7 871 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 C11orf24Q96F05 449 aaPredicted RBP9.35□□□□□ -0.91
MMP3-201ENST00000299855 SNF8Q96H20 258 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 AGPAT1Q99943 283 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 MIS12Q9H081 205 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 CLK4Q9HAZ1 481 aaKnown RBP9.35□□□□□ -0.91
MMP3-201ENST00000299855 PREBQ9HCU5 417 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 WDR6Q9NNW5 1121 aaKnown RBP9.35□□□□□ -0.91
MMP3-201ENST00000299855 PCMTD2Q9NV79 361 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 STX18Q9P2W9 335 aaKnown RBP9.35□□□□□ -0.91
MMP3-201ENST00000299855 DNAJB4Q9UDY4 337 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 AJAP1Q9UKB5 411 aaPredicted RBP9.35□□□□□ -0.91
MMP3-201ENST00000299855 PCDHGA1Q9Y5H4 931 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 IGSF9BQ9UPX0 1349 aa9.35□□□□□ -0.91
MMP3-201ENST00000299855 NCF1BA6NI72 391 aaPredicted RBP9.34□□□□□ -0.91
MMP3-201ENST00000299855 NCF1CA8MVU1 366 aaPredicted RBP9.34□□□□□ -0.91
MMP3-201ENST00000299855 NUDT19A8MXV4 375 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 NDUFS8O00217 210 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 ACSL4O60488 711 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 CIDEAO60543 219 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 ACSL3O95573 720 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 GH1P01241 217 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 CHRNA1P02708 482 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 ABCB1P08183 1280 aaPredicted RBP9.34□□□□□ -0.91
MMP3-201ENST00000299855 GOLGA8HP0CJ92 632 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 HOXB1P14653 301 aaPredicted RBP9.34□□□□□ -0.91
MMP3-201ENST00000299855 IDO1P14902 403 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 RAG1P15918 1043 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 ALOX15P16050 662 aaPredicted RBP9.34□□□□□ -0.91
MMP3-201ENST00000299855 PRKACBP22694 351 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 IVDP26440 423 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 ADSSP30520 456 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 TRIM23P36406 574 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 WDR4P57081 412 aaKnown RBP9.34□□□□□ -0.91
MMP3-201ENST00000299855 HTRA3P83110 453 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 CAMK2DQ13557 499 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 PTK6Q13882 451 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 COTL1Q14019 142 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 CYLC2Q14093 348 aaPredicted RBP9.34□□□□□ -0.91
MMP3-201ENST00000299855 RCN2Q14257 317 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 SQLEQ14534 574 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 COX20Q5RI15 118 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 STXBP5Q5T5C0 1151 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 UBAP2Q5T6F2 1119 aaKnown RBP9.34□□□□□ -0.91
MMP3-201ENST00000299855 DPY19L2Q6NUT2 758 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 PTCHD4Q6ZW05 846 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 MAEAQ7L5Y9 396 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 NLRP9Q7RTR0 991 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 MTDHQ86UE4 582 aaKnown RBP9.34□□□□□ -0.91
MMP3-201ENST00000299855 ZNF598Q86UK7 904 aaKnown RBP9.34□□□□□ -0.91
MMP3-201ENST00000299855 CCDC25Q86WR0 208 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 CCDC24Q8N4L8 307 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 TTLL6Q8N841 843 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 C1orf162Q8NEQ5 155 aaPredicted RBP9.34□□□□□ -0.91
MMP3-201ENST00000299855 SLC26A7Q8TE54 656 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 C10orf82Q8WW14 230 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 OPTNQ96CV9 577 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 GBP5Q96PP8 586 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 BTBD10Q9BSF8 475 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 MRPL4Q9BYD3 311 aaKnown RBP9.34□□□□□ -0.91
MMP3-201ENST00000299855 SSU72Q9NP77 194 aaKnown RBP9.34□□□□□ -0.91
MMP3-201ENST00000299855 SNTG1Q9NSN8 517 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 TMCO1Q9UM00 188 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 AURKCQ9UQB9 309 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 CYP3A7-CYP3A51PA0A087WV96 503 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 CAPN8A6NHC0 703 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 NT5C1B-RDH14C9J2C7 533 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 UBE2CO00762 179 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 EIF3DO15371 548 aaKnown RBP eCLIP9.34□□□□□ -0.91
MMP3-201ENST00000299855 SLC25A17O43808 307 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 ATP9AO75110 1047 aa9.34□□□□□ -0.91
MMP3-201ENST00000299855 ERAL1O75616 437 aaKnown RBP9.34□□□□□ -0.91
MMP3-201ENST00000299855 NTSR2O95665 410 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms