RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 DNAJC9Q8WXX5 260 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 MYLPFQ96A32 169 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 EBF4Q9BQW3 602 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 IARS2Q9NSE4 1012 aaKnown RBP13.92□□□□□ -0.18
CDH8-201ENST00000299345 TMEM216Q9P0N5 145 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 GTF2IRD1Q9UHL9 959 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 RAD54BQ9Y620 910 aa13.92□□□□□ -0.18
CDH8-201ENST00000299345 A0A096LPK6 155 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 PRR5-ARHGAP8B1AHC4 643 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 GOLGA8TH3BQL2 631 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 HAS3O00219 553 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 GABRDO14764 452 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 BAG2O95816 211 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 IGFBP6P24592 240 aaPredicted RBP13.91□□□□□ -0.18
CDH8-201ENST00000299345 ZNF157P51786 506 aaPredicted RBP13.91□□□□□ -0.18
CDH8-201ENST00000299345 ARHGAP8P85298 464 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 NIPAL4Q0D2K0 466 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 ANKRD20A4Q4UJ75 823 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 BTBD8Q5XKL5 378 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 ZNF354CQ86Y25 554 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 THEM5Q8N1Q8 247 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 AGR3Q8TD06 166 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 NT5C3BQ969T7 300 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 ANKRD27Q96NW4 1050 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 VAT1Q99536 393 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 MTG1Q9BT17 334 aaPredicted RBP13.91□□□□□ -0.18
CDH8-201ENST00000299345 TLE6Q9H808 572 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 SLC39A10Q9ULF5 831 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 TRIP11Q15643 1979 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 MAGEB16A2A368 324 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 GPR182O15218 404 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 TIMM44O43615 452 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 SERPINA6P08185 405 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 GM2AP17900 193 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 NPY2RP49146 381 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 ADAM17P78536 824 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 TSPY1Q01534 308 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 UBAP2LQ14157 1087 aaKnown RBP13.91□□□□□ -0.18
CDH8-201ENST00000299345 DBN1Q16643 649 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 TEX44Q53QW1 395 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 GPRIN1Q7Z2K8 1008 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 KCNMB4Q86W47 210 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 SCUBE1Q8IWY4 988 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 TNS4Q8IZW8 715 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 ATPAF2Q8N5M1 289 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 MFSD3Q96ES6 412 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 PGLYRP2Q96PD5 576 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 SIKE1Q9BRV8 207 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 CPSF2Q9P2I0 782 aaKnown RBP13.91□□□□□ -0.18
CDH8-201ENST00000299345 MID2Q9UJV3 735 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 NVLO15381 856 aaKnown RBP13.91□□□□□ -0.18
CDH8-201ENST00000299345 KRT36O76013 467 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 LRIG2O94898 1065 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 ATP5BP06576 529 aaKnown RBP13.91□□□□□ -0.18
CDH8-201ENST00000299345 PURAQ00577 322 aaKnown RBP13.91□□□□□ -0.18
CDH8-201ENST00000299345 PPIDQ08752 370 aaKnown RBP13.91□□□□□ -0.18
CDH8-201ENST00000299345 INSCQ1MX18 579 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 CCDC153Q494R4 210 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 OTUD1Q5VV17 481 aaPredicted RBP13.91□□□□□ -0.18
CDH8-201ENST00000299345 RBM15BQ8NDT2 890 aaKnown RBP13.91□□□□□ -0.18
CDH8-201ENST00000299345 TRIM62Q9BVG3 475 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 RHOBTB2Q9BYZ6 727 aa13.91□□□□□ -0.18
CDH8-201ENST00000299345 ARL5CA6NH57 179 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 AP3B1O00203 1094 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 ITM2AO43736 263 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 MOCS2O96007 188 aaPredicted RBP13.9□□□□□ -0.18
CDH8-201ENST00000299345 CDH17Q12864 832 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 MORN1Q5T089 497 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 STXBP5Q5T5C0 1151 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 KIAA0319Q5VV43 1072 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 TREML1Q86YW5 311 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 IPMKQ8NFU5 416 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 AZIN2Q96A70 460 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 MMADHCQ9H3L0 296 aaPredicted RBP13.9□□□□□ -0.18
CDH8-201ENST00000299345 DMAP1Q9NPF5 467 aaPredicted RBP13.9□□□□□ -0.18
CDH8-201ENST00000299345 ZNF358Q9NW07 568 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 COPG2Q9UBF2 871 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.9□□□□□ -0.18
CDH8-201ENST00000299345 CDC25CP30307 473 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 THPOP40225 353 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 VHLP40337 213 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 AFF1P51825 1210 aaKnown RBP13.9□□□□□ -0.18
CDH8-201ENST00000299345 ZNF135P52742 658 aaPredicted RBP13.9□□□□□ -0.18
CDH8-201ENST00000299345 USP10Q14694 798 aaKnown RBP13.9□□□□□ -0.18
CDH8-201ENST00000299345 TLDC1Q6P9B6 456 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 SCN4BQ8IWT1 228 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.9□□□□□ -0.18
CDH8-201ENST00000299345 ZNF570Q96NI8 536 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 AGAP2Q99490 1192 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 SHCBP1LQ9BZQ2 653 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 IL22Q9GZX6 179 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 GBA3Q9H227 469 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 CHRAC1Q9NRG0 131 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 PNPOQ9NVS9 261 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 ADAM28Q9UKQ2 775 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 CDY1Q9Y6F8 540 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 PSMD3O43242 534 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 SNNO75324 88 aaPredicted RBP13.9□□□□□ -0.18
CDH8-201ENST00000299345 PDHA1P08559 390 aa13.9□□□□□ -0.18
CDH8-201ENST00000299345 YY1P25490 414 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms